KEGG   Tripterygium wilfordii (thunder duke vine): 119990939
Entry
119990939         CDS       T07256                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119990939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:twl03041]
    119990939
Spliceosome [BR:twl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119990939
 Complex B
    119990939
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 zf-CCCH_4 Torus
Other DBs
NCBI-GeneID: 119990939
NCBI-ProteinID: XP_038693007
LinkDB
Position
22:11584121..11587321
AA seq 319 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
GVDAQGNPIDPRKIQDHFEDFYEDLFEELSNYGEIESLNVCDNLADHMVGNVYVQFREEE
HAANAIRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRISRDL
RRQLFGRYHRRGSRSRSRSPYRHRSYEDHSHERSRKYDDKHHYSESRRRHRSTSPSHRRG
RSRSPGRRNHSPVREGSEERRAKIEMWNREREDREGADKIKHDNGNNKAEGRDDVYMQNG
NQYHGYQQQPPPQQEGYGH
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcgtcgatattcgggacggagaaggacagagtgaactgtcctttc
tacttcaagatcggcgcatgcaggcacggtgaccgatgctctcgtcttcacaccaagccc
agcgtcagccccactctccttctttccaacatgtatcagcgccctgacatgatcacacca
ggtgtcgatgctcagggcaacccgatcgaccctcgcaagatccaagaccacttcgaggat
ttctatgaggatttgtttgaggaactgagcaattatggtgaaattgagagtttgaatgtc
tgcgacaaccttgccgaccacatggtaggaaatgtgtatgtgcagtttagagaggaagaa
catgctgctaatgctatccgaaatctatctgggagattttacgctggtcgtcccatcatt
gttgatttttctcctgtgacggactttcgtgaagcaacttgtaggcaatatgaggagaat
gcgtgcaaccgtggtggttactgcaatttcatgcaccttaaaaggatcagcagggatttg
aggcgacagttatttgggaggtatcatcgaaggggtagccgcagccgaagccgaagtcct
tatagacatcgtagctatgaagaccactctcacgagcgcagtagaaagtatgatgacaag
catcactactctgaaagtaggaggcggcacaggagcacaagccctagtcataggagaggg
cgaagcagaagcccagggaggcggaaccacagcccagtcagggaaggtagtgaggagcga
cgtgccaaaattgaaatgtggaacagggaaagagaagaccgagagggtgctgataagatc
aagcacgataatggaaataataaagctgaaggtcgagacgatgtgtacatgcaaaatggt
aatcagtaccatggatatcagcagcagccaccaccacaacaggaaggatatggacattaa

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