Tripterygium wilfordii (thunder duke vine): 119990956
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Entry
119990956 CDS
T07256
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
119990956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
twl04040
]
119990956
Ion channels [BR:
twl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119990956
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
119990956
NCBI-ProteinID:
XP_038693034
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Position
22:4348264..4352416
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AA seq
749 aa
AA seq
DB search
MFDCGYKSQYIGGQREKFVRLDEVNSTVSMASNVGGAKRCGFSFEGFGFTRRAKKNTSKS
FRKGVKKGSEGLMTFGQALRSGVTRAVFPEDLTVSEKKIFDPQDKSLLLWNRLFVISCIL
SVSIDPLFFYLPVFDQASNCLGMDIKLAVTTTTIRTIVDSFYLIRMALQFRTAYIAPSSR
VFGRGELVIDPAQIAARYLSRYFIVDFLAILPIPQIVVWNHLGKTADSEVWATKSALLDI
VFLQYVPRFVRFIPLTSELKKTAGVFAESALAGAAYYLLWYMLSSHIAGAFWYLLAVERN
DTCWQRACLESEKCNLSFLFCGNGNLPGFAEWQGVSRDVLGSQCSIEDENSPFNYGIYTQ
AISSGIVSSRIFFSKFCYCLWWGLQNLSTLGQGLQTSTYPGEILFSIALAIFGLILFALL
IGNMQTYLQSLTIRLEEMRIKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEES
IVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLCTESTYIVREEDP
VDEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAASNLPSSTRTV
RAITEVEAFALEAEELKFVASQFRRLHSRQLQHTFRFYSQQWRTWAACFIQATWRRYARR
KNAELRQQEEDFLSYDEDEEYDDESALVESNEAPAEASSSLGATFLASRFAANALRGHRL
RSISSSRDKLTEMARLQKPSEPDFNIMDA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggttacaagtcacagtacattgggggccagagggagaaatttgttaga
ttggacgaagtgaactctacagtgtcaatggcttctaatgttggtggagcaaagagatgt
ggatttagtttcgagggattcggttttaccagacgtgcaaaaaagaatacatctaaatcc
tttaggaagggagtgaaaaagggatcagaaggacttatgacatttggtcaagcacttcga
agcggagtcactcgtgcagtattcccagaagatcttacagtttccgagaagaagatattt
gaccctcaagacaaatcactacttctatggaacagactttttgtcatatcatgtattctt
tcagtgtccattgatcctttgtttttctatcttcctgtctttgaccaggcctcaaattgc
cttggtatggatataaagttagcagtcacaactacaactataagaacaatagttgattct
ttctaccttatccgcatggcacttcagttccgcacagcttatattgcaccatcgtcaaga
gtgtttggacgaggagaacttgtaatagatcctgcacaaatagctgcacgatatttatct
cgttactttatcgttgatttccttgccattctacccataccacagattgtggtgtggaat
catcttgggaaaacagcagattcagaggtatgggctacaaaaagtgctttgctagacatt
gtatttcttcaatatgtaccgaggtttgttcgctttatacctttgacttcagaactgaaa
aagacagcgggtgtttttgctgaaagtgctttggctggtgctgcatattatttgctttgg
tacatgctttccagtcacatagctggtgctttctggtatttactagccgtcgagcgtaat
gacacatgctggcagagagcttgtcttgaatctgaaaaatgcaacctcagtttcttgttc
tgtggcaatgggaatctgcctggttttgcagagtggcaaggcgtcagccgtgatgttctt
ggtagccaatgttctatagaagatgaaaattcaccatttaactacggaatttacacacaa
gctatatcatccggcatcgtttcatccagaatttttttctctaaattctgttactgcctg
tggtggggcctgcaaaatctgagcacacttggtcagggactccaaactagtacatatccg
ggagagatcctcttttccatagcattagcgattttcgggcttatactctttgcgcttctt
attggaaatatgcagacctaccttcagtctctaactattcgtctagaggagatgagaatc
aaaaggcgcgactctgagcagtggatgcatcatcgtttgcttcctcaggatctcagggaa
cgtgttaggcgctacgatcaatacaagtggctggaaacaagaggagtggatgaagaaagc
atagtccagagtttaccaaaagatctcagaagagacatcaagcggcatctttgtttgaat
ttggttagaagagtccctctgtttgccaatatggatgaaaggttgctcgatgccatctgt
gagcgactaaagccaagtttatgcacagagagcacttacatagtccgagaagaagaccca
gttgatgagatgcttttcatcattcgtggccgccttgagagtgtaacgacagatggtgga
aggagtgggtttttcaaccggggtttactcaaagaaggggacttttgtggagaggagctt
ctgacttgggcgcttgaccccaaagccgcttctaacctaccatcatctactaggacagtg
agggctatcacagaggttgaagcctttgcattggaagctgaggagttgaagtttgttgca
agtcaatttaggcgccttcatagcaggcagttacaacacactttccgtttctactcacag
caatggaggacttgggcagcttgctttatacaagcaacatggcgccggtacgctagaagg
aaaaatgcagaacttcgtcaacaggaagaagatttcctgagctatgatgaggatgaagaa
tatgatgatgaaagcgcattagtcgaatcaaatgaagctcctgcagaggcttcatcgagt
cttggtgcaacctttttggcatctcgctttgcagccaatgcactccgcggccataggctt
cgcagcatatcatcttccagagataagttgactgaaatggcaagattacagaagccctca
gaacctgacttcaacattatggatgcataa
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