Tripterygium wilfordii (thunder duke vine): 119991076
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Entry
119991076 CDS
T07256
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119991076
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119991076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119991076
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
119991076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
119991076
NCBI-ProteinID:
XP_038693194
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Position
22:complement(2333291..2337294)
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AA seq
643 aa
AA seq
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MDPTVEEQIDYGDEEYGVNQKMQYQGAGAISALADEEMIGEDDEYDDLDNDVNVGEGFLQ
MHRSEAPPPANVGNGLLQAQKIDAPDPKVEAGSTHGLSNSGVPVVGHYSNTGTRFPEQGV
QLSVKGQGLVSAGYPDGSSVSQKGQVMEIAHDAQVRNVGFQGSTSVPPNIGADIAGIPVR
IPNNPAPALNPNSGVPQILTNQTSMNPNVNCVNENEIRPSVDNGLTVLYVGELHWWTTDA
ELENVFSQYGRVKEIKFFDERASGKSKGYCQVEFYDPTAAAACKGGMNGYLFNGRACVVA
FASPQTLKQMGASYNQNQPESQPQAQGRKPMNDGIGRGNNMNYQGGDGGRNYGRGSWGRG
GQGMLNRGPGGGGHMRGRGGMGAKNMGGAGIGGPAGGGGYGQGLAGPAFVGPAGSMMYPQ
GMMGAGFDPTFMGHGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFARGMAPNG
IRMMGSSSMDGHHAGMWADSGMGAWGGEEQGRRTRESSYGGDDGASEYGHGEVNHEKGGR
PTAASREKDRGSDRDWSGNTDRRQRDEREQDWDRSEREHRYQEEKDNYRDHRQRERDSGY
KDDWDRGQSSSRPRSRSRAMPEESHRSRSRDVDFGKRRHMPSE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggacccaacagttgaagagcaaatagattatggggacgaagagtatggagttaatcag
aagatgcagtatcagggggctggagcaatatcagcacttgcagatgaagaaatgataggg
gaagatgatgagtatgatgacctagacaatgatgttaatgttggagagggcttcctccag
atgcaccgatctgaggctccacctcctgctaatgtgggaaatggactcctccaagctcag
aaaatcgatgctcctgatccaaaggttgaagctgggagcacacatgggttaagtaattct
ggggttccagttgtagggcattattctaacactgggacacgttttcctgagcagggagtc
caactgtctgttaaaggacagggattggtatctgctggctacccagatgggtcttctgta
tcacaaaaagggcaggttatggagatcgcccatgatgctcaagtccggaatgttgggttt
cagggttcgacatctgtgcccccaaacatcggggctgatattgctggtatacctgtgagg
atacccaataaccctgcacctgctctgaatcctaactccggcgttccacagattctgact
aatcaaactagcatgaatccaaatgtgaattgtgttaatgaaaatgagatccgaccatct
gtagataatggcttgaccgtgctctatgttggtgaattacattggtggacaactgatgca
gagctggagaatgttttttctcagtatggaagagtcaaggagattaagttctttgatgag
agagctagcggtaaatccaaaggctattgtcaagttgagttctatgaccctactgccgca
gctgcttgtaaaggaggaatgaatggttatctttttaatggacgtgcttgtgttgttgcc
tttgcttctccacaaacactgaagcagatgggagcctcttataaccaaaaccaacctgag
tctcaacctcaggctcagggaaggaagcccatgaatgatggtattggaagaggtaataat
atgaattatcaaggtggggatggagggaggaactatggtaggggctcttggggacggggt
ggacagggaatgctaaacagaggtccagggggtggaggtcatatgaggggaagaggagga
atgggtgcaaagaacatgggtggggctggaattggaggtccagctggtggtggaggctat
ggacaaggccttgcaggtcctgcatttgtgggtcctgctggcagtatgatgtatcctcaa
ggtatgatgggagctggattcgatccgacttttatgggtcatggtggttatggagggttt
tcaggccctggttttcctggcatgcttccatcatttcctgctgttaatgcaatgggacta
gcaggggtggctcctcatgtaaacccggccttctttgctcggggaatggcacctaatggg
ataagaatgatgggttcctcaagtatggatgggcatcatgcaggaatgtgggctgattct
ggcatgggcgcatggggaggagaggagcaaggtcgaagaacaagggagtcaagttacggt
ggtgatgatggtgcttctgaatatggccatggagaggtgaatcatgaaaagggaggtagg
ccaactgctgcttctcgggaaaaagatcgaggttctgatcgtgactggtcagggaacact
gataggaggcagcgagatgagagagaacaggattgggataggtctgaaagggagcatcga
tatcaggaagaaaaggataactatcgtgaccatcggcaaagagaacgtgactctggttac
aaggatgactgggatagagggcagtcttcttctagacctcggagcaggtcgcgtgcaatg
ccagaagaaagtcataggtctcgttcaagggacgtggattttgggaagaggagacacatg
ccgtcagagtga
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