Tripterygium wilfordii (thunder duke vine): 119991121
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Entry
119991121 CDS
T07256
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twl03036
]
119991121
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
twl00535
]
119991121
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119991121
Meiosis-specific proteins
Cohesin complex and associated proteins
119991121
Proteoglycans [BR:
twl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119991121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
119991121
NCBI-ProteinID:
XP_038693265
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Position
22:11841620..11859611
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AA seq
1204 aa
AA seq
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MYIKQVIIEGFKSYREQVATEPFSPKINCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKNE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARQKLA
EVEVARNKITETSAEMYNHKFDAHEKSKDLDKELKDLTKEVQGLSKEKEVAEKRHAEAIK
KQTKLELDVKDLQERIAGNMQAKEDAMKQLDILQKEIQYSQEELEKINPFYESQVETEKE
ITKGIMEREKQLSILYQKQGRATQFSNKAARDKWLQREIDDLERVLSSNLMQEQKIQDEI
RQLDSDLKEQDVFIESRRAEIATLESLISQSREGFTNQRAQRDRLQDERKSLWGKESTLS
GEIDKLKEEFEKAEKNLEHATPGDVRRGLNSIRRICREYKISGVCGTIIELLKCDEKFFT
AVEVTAGNSLFHVVVKDDEISTQIIRHLNSLKGGRVTFIPLNRVKAPSMTYPQSSDVVPL
LHKLDVSTEFKDAFGQVFARTVICRDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLKFMNIIRQRKEDIEMKEKELDKVRSMLQGIDQKITELVAEQQKIDAKRAHDKS
EVEQLKQDIENANKQKQFKMKAREKKEKSLAEVRAQIDQLRASMAMKWAEMGTELIDHLT
PKEKDLLSRLNPEITELKEKLIACRTDRIETETRKAELETNLTTNLKRRKQELQGIISSV
DSDLLHGEVELKKQDLDDAKLVVEAATKELNEISGRISEQTKQLKKIKDEKAKLKYMEDD
FEQRLEDEAKKSEQLLRERNAHLAKQEEYSMKIKELGPLSSDAFETYKRKSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQNRQAELDAGDEKIGELITVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHDGDDNDEDAPREADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNIIRRLADMTNTQFITTTFRPELVKVADKIYGVTHKNRVSHVNVVSKEDALDFIEHDQS
HSAD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggttataattgaagggtttaagagctaccgggaacaggttgccact
gagcccttcagtccaaaaatcaattgtgtcgttggcgctaatggatctgggaaaacaaac
tttttccatgccattcgttttgtactcagtgatctctttcaaaacctgcggagtgaagat
aggcatgcactacttcatgaaggtgcagggcatcaagtattatctgcttttgtggaaatt
gtgtttgataactctgataatcgtatcccggttgataaagaggaagtgcgactgcgtcgg
acgataggtttgaaaaaggatgagtactttttggatggaaaacacatcacgaaaaatgaa
gttatgaatttgctggaaagtgctgggttctctcgctccaacccttattatgtggtgcag
cagggaaaaatagcgtcattgacgttgatgaaagattctgaacgtctggatttactgaag
gaaattggtggaactcgagtttatgaggagagacgccgtgaaagtttgaaaatcatgcaa
gagacaggcaataaaaggaagcagatcattcaagttgttcaatacttggatgagaggtta
aaagaactggatgaggagaaagaggagctgagaaaatatcagcagcttgacaaacagcgg
aaatctctagaatacacaatttatgacaaggaacttcatgatgctcggcagaaattggca
gaggttgaagtggctcgaaacaagatcactgaaacttctgctgaaatgtataaccataag
tttgatgctcatgagaagtccaaggacttggacaaggagttgaaagatttaacaaaggaa
gttcagggattgagtaaagagaaagaagtggcggaaaagcgacatgctgaagcaataaag
aagcaaacgaaacttgagcttgatgtgaaggacctgcaggagaggattgctggaaatatg
caggccaaagaggatgcaatgaaacagcttgatattctgcagaaagaaatacaatattca
caggaggagcttgagaaaattaatcctttttatgagagccaagttgaaacggaaaaggag
attacaaaaggaataatggagcgtgaaaagcagcttagcattctttatcagaaacaaggt
cgtgccacccaattttccaacaaagctgcccgtgacaaatggcttcaaagggaaattgat
gatcttgaacgcgttctttcttcaaatttgatgcaggagcaaaaaatccaggatgaaatc
cgtcagcttgattccgatctgaaggaacaagatgttttcattgagagtcgccgagctgaa
attgcaaccttagaatccctcatttcccaatcacgtgaaggattcaccaatcaaagagca
caaagagaccggttgcaggatgagcggaagtcattgtgggggaaagaaagcacactttct
ggggaaattgacaaattgaaagaagaatttgagaaggctgagaagaaccttgaacatgca
acacctggtgatgtgaggagagggctgaattctattcgtcggatttgcagagagtataaa
atcagtggagtttgtggtacaattattgagttgcttaaatgcgatgagaaatttttcact
gctgttgaagttactgctggaaacagcttatttcatgtggtggttaaagacgatgaaata
tcaacacagataattagacacctaaattccttgaaaggaggacgggttacatttatacca
ctcaacagggtgaaggctccatccatgacttatccacagagttctgatgtggtacccctg
ctacataaattggatgtttcgactgaatttaaggacgcatttggccaggtattcgctaga
actgtgatttgccgggatttggatgtggccactagagttgcgcgaactgatggcttggat
tgcataactttggaaggtgatcaagtaagcaagaaaggcggtatgacgggaggtttttac
gattataggcgctctaaattgaaatttatgaacatcatcaggcagaggaaagaagatatt
gaaatgaaggaaaaagaactggataaagttagatccatgcttcaaggtatagaccaaaaa
attacagaacttgttgccgagcagcagaaaattgatgctaagcgtgctcacgacaaatcc
gaggtggaacagctaaagcaggatattgagaatgctaacaagcagaaacaatttaagatg
aaagctcgtgaaaagaaggaaaagtctcttgcagaggtcagggctcaaattgatcagctt
agggctagtatggccatgaaatgggcggaaatggggacggagctcattgatcacttgacg
ccaaaggagaaagatcttttatcaagattgaatcccgaaataacagaactgaaagagaag
cttattgcctgcaggactgatcgaattgagactgaaacgagaaaagcggagcttgagact
aaccttacaactaatctgaagaggcgtaaacaagagttgcaaggcattatatcatctgta
gattctgacttgttgcatggcgaagttgaactaaaaaagcaggacctggacgatgctaaa
ttggtggttgaagctgcaactaaggagctcaatgaaatctctggccgtatatctgaacaa
acaaagcaactcaagaagatcaaagatgaaaaggctaaactaaagtatatggaagacgat
tttgagcaaagacttgaggatgaagccaagaaatcagaacaacttttgcgtgaaaggaat
gcacatcttgctaaacaagaagagtactctatgaaaattaaagaacttggcccgctgtca
tcagatgcttttgaaacgtataagcggaagagcatcaaagagctgcataaaatgctccat
aggtgcaatgagcagctgcagcaattcagccatgtaaacaagaaagcgctggaccaatac
gtaaatttcactgagcaacgagaagagcttcagaaccgacaagctgaactggatgcaggt
gacgagaaaattggagaactgataacagttttagatcaacggaaggatgaatcaatagaa
cgcacttttaaaggtgttgctcgacactttcgagaagtattttcagagcttgtgcaaggt
ggccatggccatctggtcatgatgaagaaaaaggatggtgatcatgatggtgatgacaat
gatgaagatgcccctcgtgaagcagatttggagggaagagttgagaaatacattggagtg
aaagtaaaggtttcttttactggtcaaggggagacgcaatcgatgaagcagttgtcgggg
ggtcaaaaaactgttgtagctctgacactgatcttcgctatacagcgatgtgatcctgct
cccttttatctttttgatgagatagatgcagcactggatcctcagtacagaactgctgtt
ggaaatataattcgtagactggcagacatgactaatacacaatttataaccacaacattc
cgaccagagctcgtgaaagttgctgacaagatttatggggtgacgcataaaaacagggtg
agccatgtcaacgtcgtctccaaggaagatgccttagattttattgagcatgaccagtct
cacagtgctgattaa
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