Tripterygium wilfordii (thunder duke vine): 119991130
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Entry
119991130 CDS
T07256
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twl03036
]
119991130
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
119991130
REST complex
119991130
Heterochromatin formation proteins
Other heterochromatin formation proteins
119991130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Orthopox_F6
Motif
Other DBs
NCBI-GeneID:
119991130
NCBI-ProteinID:
XP_038693286
LinkDB
All DBs
Position
22:complement(2916468..2925732)
Genome browser
AA seq
1416 aa
AA seq
DB search
MKRSRDDVYMGSHSQLKRPVVSSRGETSGHAHLMGGGGGAAAAAAGAPQKLTTSDALHYL
KAVKEIFQNNREKYDDFLEVMKDFKAQRVDTTGVIARVKELFKGHRELILGFNTFLPKGF
EITLASDNEPPQKKPVEFDEAINFVNKIKTRFQGDDRVYKSFLDILNMYRKENKSISDVY
MEVAALFEDHTDLLTEFRHFLPDTSAAGSVNYISSGRFRDRSSGMPAMRQMVVDKRERTA
ASHSDRDLSVDRPDLDHDRGLMKTEKEQQRRGEKEEDRRDDRERRDHERDDRDFEHDGNR
DFNMQRKWKPGRRPEGSMGEQLHQGMISQELAFCEKVKEKLHNPDDYQEFLRCLHLYTRE
IITRSELQSLVSDLLGRYPDLMDGFNEFLARCEKNEGLLAGVVNKKSLWIEGYPPRSVKV
EDRDRDSERDDVVKVRDRENRERDRLDKCLGNKEPGGPRMSLISNKDKYVGKPINELDLS
NCECCTPSYRLLPKSYPIPSASQRTDIGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESL
FRCEDDRFELDMLLESVNVTTKRAGELLEKINNNTIKAESPIRIEEHFTALNLRCIERLY
GDHGLDVMEVLRKNASLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRS
FYFKQQDTKSSSAKALLAEIKEISEKKRKEDDVLLAIAAGNRRPIIPNLEFEYPDSDIHE
DIYQLIKYSCGEVCTTEQLDKVMKIWTAFLEPVLGVPSRPEGAEDTDDVVKSRNHSVKSS
GESDGSPGGDSAIINSKPNPSRNGDESTPQEQSSSSKAWVINEDNGPKVVGSLDADQTRK
NDTFSCTHHHDKVQPNPGMAGEISGVSKEVGCSERLVNSNASLANGAEQSNGRTKVETTS
GLATPSRTCNGTIEGGTELRSNNEIVPSEQGGDSVRPTISTNGMVPEGTKTHRYNEESIG
PFKIEREEGELSPNGDFEEDNFAVYGETGLDSLHKVKDNSASRQYQTRHGEGRCGEAGGE
NDADDEGEGSAQRSSEDSENASENGDVSGSDSGEVEECSQEEHEEDGGHDEHDNKAESEG
EAEGMADAHDVEGDGTPLPFSECFLSTVKPLAKHVPQALHDRENGSRVFYGNDSFYVLIR
LHQALYERIQSAKINSSSGERKWKASNDSSPNDLYARFMNALYNLLDGSSDNTKFEDDCR
AIIGTQSYVLFTLDKLIYKLVKQLQAVAADEMDSKLLQLHAYENSRKRERFFDAVYHENA
RVLLHDENIYRIECSSVPTSLSIQLMDYGHDKPEVTAVSMDPNFAAYLYNDFLSVIREKK
ERPGIFLKRNKHKYGGADEFSSTRLAMEGLQIGNGLECKIACNSSKVSYVLDTEDFLFRR
RRNTKSLQQNNSCRNQANSSNGGSARVERFHRFLSN
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcgagagacgatgtttacatgggctctcattctcaactcaaacggccggtg
gtgtcttctcgcggagaaacgtctggtcatgcgcatttgatgggaggaggtggaggagca
gcagcagcagctgcaggtgcaccacagaaattaacaacaagcgatgctttgcactatctc
aaggcagtgaaggaaatatttcaaaacaatagagaaaaatatgatgacttccttgaagtt
atgaaagattttaaggcccaaagagttgacactacgggtgtaatagctagggtgaaggaa
ttgtttaaaggtcaccgagaactaattctgggtttcaatacctttttgccaaagggattt
gagattactcttgcatctgataatgaacctccgcaaaagaagcctgttgaatttgatgaa
gctataaattttgtcaacaagattaagacaaggttccaaggtgatgatcgtgtttataaa
tcatttttagatattttgaacatgtatagaaaagaaaacaaatccatcagtgatgtttat
atggaggttgcagcactctttgaagaccacactgatctgctaacggagtttaggcatttc
ctacctgatacttcagccgcaggctctgtgaattacatttcatctggtagattccgagat
aggagctctggcatgcctgcaatgcggcaaatggttgttgacaagagagagaggacggct
gcttctcattctgatcgtgatcttagtgttgatcgccctgatctagaccatgatagaggt
ttgatgaaaacagaaaaagaacagcagagacgcggtgaaaaggaagaggataggagagat
gaccgagagagaagagaccatgagagggatgatagggactttgagcatgatggcaataga
gacttcaatatgcaacggaaatggaaacctggtcgtaggcctgaaggctccatgggtgag
caattgcaccaaggtatgattagccaagagcttgctttctgtgagaaagtgaaggagaag
ttacacaatcctgatgattaccaagaatttttgagatgtcttcatctctataccagagaa
ataatcacaagatcagaattgcaatctttggtgagtgatttacttggaagatatccagat
cttatggatggatttaatgaatttttggcccgctgtgagaagaatgagggcttacttgct
ggtgttgtgaataaaaaatccttgtggattgaaggatatcctccacgatctgtgaaggta
gaggaccgagatagagatagtgaaagggatgacgtggttaaagtcagagatcgtgaaaat
cgggagagagatagacttgacaaatgtcttggaaacaaagagccaggtggtcccaggatg
tctttgatttccaacaaggataagtatgtgggaaaacctattaatgaacttgacctctca
aactgtgaatgctgcactcccagctaccgacttctgccgaagagttatccaataccatct
gcaagccaaagaacagatattggtgctcaagtattgaacgatcattgggtatctgtaact
tcaggaagtgaggattattcttttaaacacatgcggaaaaaccagtatgaggaaagcctg
tttcgatgtgaggatgacaggtttgaactggacatgttgttagagtctgtgaatgtgaca
actaagcgtgcaggagaactattagagaagatcaacaacaatactatcaaagcagagagt
ccaattcgtattgaggagcactttacagctctaaatttaaggtgcattgaacgtttgtac
ggtgaccatggtcttgatgtgatggaggtgttacgaaagaatgcttcccttgctttgcca
gttattttaactcgcttgaagcagaagcaggaagagtgggctaggtgccgtgctgatttt
aataaagtttgggctgaaatttatgcgaagaactatcacaaatcgctggatcatcgtagc
ttctatttcaagcagcaggataccaagagctcgagcgcaaaagccttattggcggaaatc
aaagaaattagtgagaaaaagcgcaaggaagatgatgtgcttcttgctattgctgctgga
aatagacgacctattattccgaatttggagtttgagtaccctgattctgacattcatgaa
gatatatatcagcttatcaaatattcttgtggagaagtttgtacaactgaacaattggat
aaagtaatgaagatttggacagccttcttggaacccgttcttggtgttccttccaggcct
gagggtgcagaggacactgatgatgttgtcaaaagtaggaaccattctgtgaaaagtagt
ggggaaagtgatggaagccctggtggtgattcggccatcataaattccaaaccaaatcct
tccagaaatggagatgaaagtactccacaagagcaatcaagttcttcaaaggcttgggta
ataaatgaagataatggacctaaagtagttggttctcttgatgcagatcaaactcgtaaa
aatgatacttttagttgtactcaccaccatgataaagtgcagcctaatccaggtatggct
ggtgaaatttcaggggtcagtaaagaagttggctgcagtgaacgattggtcaattcaaat
gcttcacttgccaatggtgcagaacaaagtaatgggagaactaaagtggaaaccacatca
gggcttgccactccttccagaacttgtaatggcaccattgagggtggtactgagttgagg
tcaaataacgaaattgtgccttcagagcagggtggtgatagtgtgcgaccaactatatcc
accaatgggatggtgccagaaggtaccaaaactcatagatacaatgaagaatctattgga
ccatttaaaattgaaagagaggagggtgaattatccccaaatggagattttgaagaggac
aattttgcagtttatggagaaactggtttggattctttgcacaaggtaaaggataattct
gccagcaggcagtatcaaacgagacatggagaaggaagatgtggggaagcagggggagaa
aatgatgctgacgatgagggtgagggtagtgctcaaagatcatcagaggatagtgaaaat
gcttctgagaacggtgatgtttctggaagtgattctggtgaagttgaggaatgctctcag
gaagagcatgaagaagatggaggccatgatgagcatgataataaggctgagagtgaaggt
gaggctgaagggatggcagatgcccatgacgttgaaggtgatggaacaccattaccgttt
tcggaatgttttctttcgactgtgaaacctctggcaaagcatgtccctcaggcattacat
gacagagaaaatggttctcgggttttctacggaaatgattctttttatgtgcttataagg
ctacatcaagcattatatgagagaatacaatctgctaagatcaattcgtcttctggtgaa
agaaaatggaaagcttcaaatgattcaagccctaatgatctctatgcgaggtttatgaat
gcactttacaatttacttgatggttcttctgataatacaaaatttgaggatgattgtcga
gctatcattggaactcagtcatatgtcctattcacattggacaaactgatctataaactc
gtcaaacagctccaagcagttgcagctgatgagatggacagcaagcttcttcaactacat
gcctatgaaaattcaagaaaacgtgaaagattttttgatgcagtttatcatgaaaatgcc
cgtgttcttcttcatgatgagaacatatatcgtattgaatgttcttctgtgccaaccagt
ttgtctattcagcttatggattatgggcatgataaaccagaggtgactgcagtttccatg
gatcctaattttgcagcttatctgtacaatgactttctctcagttattcgtgagaaaaaa
gagagaccaggaatttttttgaagaggaataaacacaaatatggaggtgctgatgaattt
tcttccacacgcctagccatggaaggacttcaaattggtaatgggttggagtgtaagata
gcgtgcaattcatccaaggtctcgtacgtcttagataccgaagattttttgtttagaagg
agaaggaatacgaaaagtttgcagcagaacaattcttgccgcaatcaggcaaattcttca
aatggtggctcagctagagtagagcggtttcacagatttctatcaaattga
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