KEGG   Tripterygium wilfordii (thunder duke vine): 119991273
Entry
119991273         CDS       T07256                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03030  DNA replication
twl03410  Base excision repair
twl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119991273
   03410 Base excision repair
    119991273
   03420 Nucleotide excision repair
    119991273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:twl03032]
    119991273
   03400 DNA repair and recombination proteins [BR:twl03400]
    119991273
Enzymes [BR:twl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     119991273
DNA replication proteins [BR:twl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    119991273
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      119991273
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 119991273
NCBI-ProteinID: XP_038693518
LinkDB
Position
22:11676731..11703206
AA seq 2228 aa
MNGDSRRRDRRDLTRSSKKQKQIFSAEEELESKLGIDLFSEGDKRLGWLLTYASSSWEDQ
ETNKVYSCIDLYFVTQDGSSFKSKCRFRPYFYAATKEKMEMDVDAYLRRRFESQIADIEI
VDKEDLELKNHLSGLHKLYLKISFDTVQQLMEVKRDLLHVVERNRAKSDAAEAYESILTG
KREQRPQDFLDCVVDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSNGVVLEKRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLVMMISYMVDGQGYLITNRECVGEDIENLEYTPKPE
FEGYFKVTNAKNEVELLRHWFAHMREVKPGIYVTYNGDFFDWPFLERRAAHHGYILSNEL
GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR
FAKEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQSDPEKFYKNHLLDSETYIGGHVECLESGVFRSDIRTSFKLDPSAY
QQLINNLDRDLQYAIRVEGKMELDSVSNYDEVRNAILEKLVRLQDEPTREECPLIYHLDV
AAMYPNIILTNRLQPPSIVTDDVCTACDFNRPGKTCLRKLEWVWRGDIFMAKKSDYYHLK
KQIESEFVEGGNGQLSKSFLDLPKTEQQLKLKERLKKYCQKAYKRVLDKPVTELREGGIC
MRENPFYVDTVRSFRDRRYEYKGLNKTWKGKLAEAKASGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCA
LPGSFPENFTFKSKDGKKKLTISYPCVMLNVDVARNNTNHQYQTLIDPVTKTYTTHSECS
IEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGLTLEECYAAVAAVANRWLDLLDNQGKNIADSELLDYISESSTMSKSLADYGE
QKSCAVTTARRLADFLGDTMVKDKGLHCQYIVACEPRGTPVSERALPVAIFETDAEIAKF
YVRKWCKTSLDIGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVTNPVPRVVHPDWLHKK
VREKEDKFRQRKLVDIFSSSHRNDLLEKANNSIINPVTNGEHVEDMEDFGSKTRSPVNGP
RPVVNSYEFNNKERPVQTIGQVESLQQQTDGKNDLFTDNIDKNKDYQGWLELKKRKWKDT
LARRKRQRLGSSRTPHRADGASEVMEGMISKRGDQAKTGVGSYFRRHEVALTRCHWQIIQ
LVPGSQTGQFFAWVVVEGIMLKVPINVSRVFYLNSKAPITEKFPGKRVSKTLPHARHSYN
LIEINIDEDKFKKESKKLEALLADPEVEGIYETKVPLEFNAILQIGCVCKVNKTAKRRNA
QDSWNLTELHMKTTTECSYLEQSISFFYLYHSISEGRAIYVGYFPASNTMYVVVVNPYQN
KDLSQSFLEKQYREACQAMSIEPPPRNGISFKVDYVGYVKDAENIIQRAVNEHRHEHRGA
AIAVIECPNVNVMKSNVRALDDFPCLKIPSNARDNHYQVLGWQQVAAKIAMQRCAASSQW
LNERISLSRYAHVPLGNFELDWLIFTADVFFSRALRDQQQVLWISDNGVPDLGVTNEEDT
CFADEVHQPVLTYPGAYRRVTVELKIHHLAVNALLKSNQVNEMERGALLGFDQEVNTGAF
NLDEQCGFDEATCSAPAFRVLKQLIQRCLADAVTLGNVFADAILQHLYRWLCSPHSKLHD
QALHRLLHKVNAARTYDILFNQKINISTMQYSQMVMQKVFALLLAELRKLGAKVIFANFS
KVIIDTGKSDIAAAKAYCDSLVKALQTRELFEWIELEPLNFWHSLLFMDQYNYGGIPVRA
DEMSHDESQVDIVSSWNIADYLPKKIQDHFVYIVSQFLYIPWIYGQKQAETRSSLQGGYS
STPSITVAASENFENHMVEYLKQQISSYFTDKLLDIVRDTVHHMKGMNRFETDQPTKTGM
LQPSLHKGDAALEFIKHVCAVLALDHNVQHDVLVMRKNLLKYVRVREFAPEAEFHDPCPS
FILPNVICSYCNDCRDLDLCRDSALLAHEWRCAVPQCGQPYDREVMENALLQIVRQRERL
YHLQDLVCLRCNQVKAAHLTEQCACAGSFRCKEDVSEFQRKMQIFLNVAIHQKFELLREC
TSWILEVQ
NT seq 6687 nt   +upstreamnt  +downstreamnt
atgaacggtgacagccggagacgagatcgtagagacctgacgcggagctccaagaagcag
aagcaaatcttcagcgccgaggaggagctcgagtccaagctagggatcgatctcttctct
gagggcgacaagcgcctgggatggttgctcacctatgcatcatcctcttgggaggaccaa
gagaccaacaaagtgtatagttgcatcgatctctattttgttactcaggatggttcttca
tttaagtcaaagtgcaggttccgtccttacttctatgctgccacaaaggaaaaaatggaa
atggatgtggatgcatacttgaggcgacgttttgaaagtcaaattgctgacatagagatt
gtagacaaagaggacctagaactgaaaaatcatttatctggtttacacaagttgtattta
aaaatatcttttgatacggttcaacaattgatggaagtgaaaagagatctcttgcatgta
gtagagagaaatcgggcaaagtctgatgctgcagaagcgtacgaatccatcttaactggg
aaaagagaacaaagacctcaagattttctagattgtgtagttgacctccgcgagtatgat
gttccttaccatgttcgctttgccatcgacaatgatgtgcgatgtggacagtggtatgat
gttagcgtctctagtaatggtgttgtacttgagaagaggactgatcttctgcaacgtgct
gaagttcatgtttgcgcatttgatattgaaactacaaagcttcctctgaaatttccagat
gctgaatatgatttggtaatgatgatatcatacatggttgatggacaaggatacctgatc
actaacagagagtgtgttggagaagacatcgaaaatttggagtatactccaaaaccagaa
tttgaaggttactttaaagtaacaaatgccaagaatgaggttgagcttcttaggcattgg
tttgcccacatgcgagaggtgaagcctggtatttatgttacatataatggtgattttttt
gactggccattcctggagaggcgagcagctcatcatggatatattctgagtaatgagtta
ggatttcaatgtgacaagaatcagggagagtgccgtgctaagtttgcttgccacttggat
tgttttgcttgggttaaacgtgatagttatctccctcaggggagccagggtttaaaggct
gttacgaaggccaagttgggatatgatccacttgaggtgaatccagaagatatggttcgc
tttgcaaaggaaaagcctcagatgatggcatcctactctgtttcagatgctgtttcaact
tattacttgtatatgacatatgtccatccattcattttctctcttgcaactataattccc
atgtcgccagatgaggttttacgcaaaggtagtgggaccctctgtgaaatgcttcttatg
gtacaggcttacaaggcaaatgttatctgccccaacaaacatcaatctgaccctgagaaa
ttctataagaatcaccttcttgatagtgagacgtatataggtggacatgtggaatgcctt
gaaagtggtgttttcagatctgatattcggaccagttttaagcttgatccatctgcatat
cagcaacttatcaacaaccttgatcgtgatttgcaatatgctataagagtggagggtaag
atggagttggactcagtctccaattacgatgaagtgaggaatgctatccttgaaaagcta
gtgaggttgcaagatgaacctacacgtgaagaatgccccctcatttatcacctggatgtg
gcagcgatgtatccaaacatcattttaacgaacagacttcagcccccatcaattgttaca
gatgatgtctgcactgcatgcgatttcaatcgacctggaaaaacttgtcttcggaaactt
gaatgggtttggcgtggagatatattcatggcaaagaagagtgactattatcatttgaag
aagcaaattgagtctgagtttgttgaaggcggcaatggtcagttatcaaaatcttttctt
gatctgccaaagacagagcaacagttgaagctcaaagagcgtctgaaaaagtactgtcaa
aaggcatataaacgtgtacttgacaaaccggtcactgaacttcgtgaaggggggatatgc
atgagagaaaatccattttatgtggacactgttcgtagctttcgagatagaaggtatgaa
tacaaaggactcaataaaacttggaaggggaagttggcagaagcaaaggctagtggaaac
tctattaagattcaggaagcgcaagacatggtggtgctttatgattctttacaactggct
cacaagtgtatacttaattccttttatggatatgtcatgcgcaagggtgcaagatggtat
tcaatggaaatggctggtgtagttacatatactggagcaaaaatcattcaaaatgctcgc
ttgcttgttgagaaaatagggaagccacttgaattagatacagatggtatttggtgtgcg
cttcctggatcttttcctgagaactttactttcaaatcaaaagatgggaaaaagaagctg
acaatatcatatccatgtgtcatgcttaatgttgacgttgcaagaaacaatacaaaccat
caataccagacgctgatagatcctgtcactaaaacatatacaactcatagcgaatgctca
attgaattcgaagtggatggaccttacaaggcaatgattattcctgcttccaaggaagaa
ggaattcttataaagaaaagatatgctgtttttaatgatgatggaacccttgcggagctt
aagggttttgagatcaagcgtagaggcgagctaaagctcatcaaagttttccaggccgag
ctttttgacaagttcctccatggcttaaccttagaggaatgctatgcagctgttgctgct
gttgcaaaccgctggcttgatcttcttgataatcagggtaagaatattgcagacagtgag
ttgcttgattacatatcagaatcgagcacgatgagcaagtccttggcagattatggtgaa
caaaagtcatgtgcagtgaccactgccaggcgtctagctgattttctaggtgatacaatg
gttaaagacaaaggattgcattgccagtatatagttgcatgtgaaccaagggggacccct
gttagtgagcgtgctcttcctgttgcaatatttgaaactgatgctgaaatagcgaagttt
tatgtaagaaaatggtgcaagacttccttagatattggaattcgatccatcattgactgg
tcatattacaagcaacgtcttagttcagcaattcaaaaaattatcaccattccagctgca
atgcaaaaggtgacaaatcctgtccccagggtggttcatccagattggctgcataaaaag
gttcgtgagaaggaggacaaatttcgtcaacggaaattggttgatatcttcagctcatca
cataggaatgatttgttggaaaaggctaataattcaataattaatcctgtaacgaatgga
gagcatgttgaggatatggaagacttcggaagcaaaaccagaagtcctgtcaatggacct
agacctgttgttaatagttacgaattcaataacaaagaacgaccagttcagactattgga
caagtagaatccttgcaacaacaaactgatggtaaaaatgatttatttaccgacaatatt
gataaaaataaagattatcaaggatggcttgaactgaagaagagaaaatggaaggataca
ttggcaagaaggaagagacaacggttgggtagttcaaggactccacaccgggccgatggt
gcttctgaggtgatggaaggcatgataagtaaaaggggagatcaagccaaaactggtgtt
ggttcatattttaggaggcatgaagttgccctaacacgctgccactggcagataatacag
cttgttccaggttcacagactggccaattttttgcttgggtggtggttgaaggaattatg
cttaaagttcctataaatgtttcaagagtattttaccttaattcaaaagcgcctataacc
gaaaaattccccgggaagcgtgttagcaagactcttccccatgcgaggcatagctataac
ctaattgagattaatattgatgaagataaatttaagaaagaaagcaaaaagctagaagct
ctccttgccgatccagaggttgaggggatttatgagacaaaagtaccacttgaatttaat
gctatcctgcaaattggttgtgtctgtaaagtcaataaaacagctaagagacgcaacgcc
caggatagctggaacctgactgaactgcacatgaagactacaactgaatgttcatatctg
gagcaatcaatctccttcttttacttgtaccatagcatctctgaaggaagagctatatat
gttgggtattttcctgcatccaacacaatgtatgttgttgtggtaaatccttaccaaaat
aaggatttgtcgcaatcctttcttgaaaaacaatatcgtgaagcttgccaggcaatgtct
attgaaccacctccgaggaatggcatcagtttcaaggtggactacgtcggatatgtcaag
gatgccgaaaacattatacagagagcagtaaatgaacacagacatgagcatcgtggagca
gcaattgctgtcattgaatgcccaaatgtcaatgtgatgaagtcaaatgtacgtgctctt
gatgatttcccatgcctgaagattccctctaatgctcgtgataatcactatcaggtactt
ggttggcaacaagttgctgcaaaaattgctatgcaacgttgtgccgcatcatctcagtgg
ttgaatgaaagaatttctctctcaagatatgcacatgtacctttgggaaattttgaactc
gactggctcatatttactgcagatgttttcttctcaagagcattacgtgatcagcaacag
gtgctttggatatctgataatggtgttccagatctaggagtcaccaatgaagaagataca
tgttttgctgacgaggtccaccaacctgttcttacgtaccctggagcatatagaagagtc
actgtggagctgaagattcatcacctagctgtaaatgctcttttgaaaagcaaccaagtg
aatgaaatggaaagaggtgctttgttaggatttgaccaggaagtgaataccggtgcattt
aacttagatgaacaatgtggctttgatgaagctacctgctccgctcctgcatttcgtgta
ctgaaacaactaatccagagatgccttgcagatgcagttacgttaggaaatgtgtttgct
gacgcaatcttacaacatctgtatcgatggctttgcagccctcattcgaaacttcatgat
caagctcttcaccgtttacttcacaaggtgaatgctgctcgaacatatgatatccttttt
aatcaaaagattaatatttccacaatgcagtacagccaaatggttatgcaaaaggtgttt
gctttgttgctggccgagcttcgaaaattgggtgcaaaagttatatttgcaaatttctcc
aaggttattatagacacaggaaaatctgatatagctgctgccaaagcttactgtgatagc
ttagtcaaggctctgcaaactagagaactgtttgagtggattgaacttgagccattgaac
ttctggcattcgttgctttttatggatcagtataactatggtggcataccggtgagagct
gatgaaatgtcgcatgatgaatcacaagtggatattgtatcgagctggaatattgcagac
tacttgcccaagaaaattcaggatcattttgtttatatcgtgtctcaatttctttatatc
ccttggatttatggacaaaagcaagctgagaccagatcatctttgcaaggtggctactca
agcactccttcgatcacagttgcagcttcagagaatttcgaaaatcacatggtggaatat
cttaaacagcagatcagctcttacttcacagacaaacttttagatattgtccgtgatact
gtccatcatatgaaggggatgaacagatttgagactgaccaaccaactaaaactggaatg
ttgcaacctagcttgcacaaaggagatgctgcattggagttcataaagcacgtatgtgct
gttcttgctcttgaccataatgtgcagcacgatgttctggtgatgagaaagaatctattg
aaatatgtgcgtgtgagggagtttgctcctgaagcagagtttcatgatccctgcccttct
ttcatcttgccaaatgtaatctgcagctactgcaatgactgcagagacctggacttatgc
cgtgactcagctttactagctcacgagtggcgttgcgctgtgccacaatgtggacaacct
tatgatcgtgaggtcatggaaaatgctcttcttcaaattgtacgccagagggaacgcctt
taccatttgcaggatctggtgtgccttaggtgcaaccaggttaaagctgctcatttgact
gaacaatgtgcatgtgctggctcgtttaggtgcaaggaagatgtatcagaatttcagagg
aaaatgcagattttcttaaatgtagccattcatcagaagtttgaacttctgcgagagtgc
acctcatggatattagaagttcaatag

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