Tripterygium wilfordii (thunder duke vine): 119991419
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Entry
119991419 CDS
T07256
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119991419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119991419
03400 DNA repair and recombination proteins [BR:
twl03400
]
119991419
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119991419
Transcription machinery [BR:
twl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
119991419
DNA repair and recombination proteins [BR:
twl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
119991419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
119991419
NCBI-ProteinID:
XP_038693701
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All DBs
Position
22:4932009..4933137
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AA seq
259 aa
AA seq
DB search
MQTINRIYSFINDKRFKKNGTTNERNIEEYIINVTAQDLVLPPSVEIVDNTQHIAILTEP
IYFCIELQIERHRGYHIKTPNNFQDGSFPIDAVFMPVRNTNYSIQSYRNGSEKEEILFLE
IWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLENDWYKVTLPLFTFHDRLTKLKK
NQKEMALKYIFIDQLELTPRTYNFLKRSNIHTLFDLLHKSHEYLMKMEHFHIEDVKHILN
ILEKKKFAIDLPDLPKNKL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccatcaacaggatttacagcttcatcaatgataaaagattcaagaaaaatggg
actaccaacgaaagaaatatagaagaatatataattaacgtaactgctcaagacctcgtc
ttacccccttctgtcgaaatcgttgataatacacaacatatagctatactaacagaaccc
atttatttttgtattgaattacaaatcgagagacatcgaggatatcatataaaaacaccc
aataactttcaagatggaagttttccgatcgatgctgtattcatgcctgttcgaaataca
aattatagtattcagtcttatagaaatgggagtgaaaaagaagagatactttttctcgaa
atatggacaaatggaagtttaactcctaaagaagcacttcatgaagcctctcggaatttg
attgatttattcattccttttctacatgcggaagaagaaaacttacatttagaaaacgac
tggtacaaggttactttacccctttttacctttcatgatagattgactaaactaaagaaa
aatcaaaaagaaatggcattgaaatatatttttattgatcaattagaattgactcctagg
acctataatttcctcaaaaggtctaatatacatacattatttgaccttttacataagagt
cacgaataccttatgaaaatggaacattttcacattgaagacgtgaaacatatattgaac
attttagaaaaaaaaaaattcgcaattgatttacctgatttaccaaaaaataaactttaa
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