Tripterygium wilfordii (thunder duke vine): 119991609
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Entry
119991609 CDS
T07256
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119991609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119991609
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119991609
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
119991609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BAR_3
Motif
Other DBs
NCBI-GeneID:
119991609
NCBI-ProteinID:
XP_038693894
LinkDB
All DBs
Position
22:complement(10849532..10868362)
Genome browser
AA seq
1403 aa
AA seq
DB search
MAQSKQKSEDIVFTKRPYVEDLGPRRIKSMQFSMFSGSDILKAAEVQVYQGRYYGSSEPI
EGGLLDLRMGPPNKGPPNKGTGDKGWICATCHGDFAQCPGHYGYLSLALPVYNVGYLSMI
LDILKCICKSCSRILLEENLRKDYLKKMRSPKVEPLRKTELMKLVVKKCNTIVKCSRCGY
INGKVKKGVSALGIIHDRSKSSDENDKECRFAALSHTKEPLSAATYMLNPVTVLSLFRKI
SNEDCELLYISERPEKLIITVIAVPPTVIRPSVLMDGSQSNENDITERLKRIIEANATLH
QELLETSTALKSLASWDTLQFEFAQYINSDVRGVPYHMQVTKPLSGLVQRLKGKQGRFRG
NLSGKRVEYTGRTVISPDPNLKITEVAIPIHMAKLLSYPERVSCHNIEKLRQCVRNGTWK
YPGAKTVRKSDNSQPHYLFMDYRKRLADELKIGWIVDRNLEDGDIVLFNRQPSLHRMSIM
CHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN
GEILVASTQDFLTSSFLITRKDTFYDRANFSLMCSYMGDGMDHIDLPTPAIFKPVELWTG
KQLFTILLRPRASLKVYLNLTVKEKNYSKPEKGERERETMCPNDGFVYFKNSELISGQLG
KATLGNGNKDGLYSVLLRDYKAHAAATCMTRLAKLSARWIGNHGFSIGIDDVQPKEKLNE
EKGNTLLVNYRKCDRKIHDFNEGKLKLQPGCDAAQTLEAEISGILNKIRDLTARVCMETL
HWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGHRAPNGFIERSLPHFPRKSKTPAAK
GFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDDTVR
NASGGIVQFFYGDDGMDPAAMEGKNGFPLNFDRLLMKVKATCPAKEDRFLSVDNISDIVE
EQLSEHEKYLGDGCSEAFKKSLRGFLENHLRESKHTIECFKKNSVGEKSEVLEEIANKIS
GVTQKQLKVFLETCFTRYRAKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNIT
QGVPRIKEIINGAKKISTPIITAELEHGDNINAARMVKGRIEKTVLGQVAKSIKIVMTSR
LASIVITLDMEIIQDAQLCIDANTVRESILQTPRINLNAECVRVLDVYKLEVLPPKAEAG
KSGVHFQLHSLKSVLPFINVKGIKSVERAVIAEKEKKKGEEIQRFNVLVEGNGLQDVMGT
EGVDGRNTKSNHVIEVQQILGIEAARKCIIDEIKQTMECHGMSIDIRHMMLLADVMTSRG
EVLGITRFGVQKMGKSILMLASFERTSDHLFSASVNGRDDKIEGVSECIIMGIPMQIGTG
IIKVMQRVDSTPMLTYGSDPILS
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagtaaacaaaaatcggaagacatcgtgttcacgaagcggccgtacgtggag
gatttaggcccgcgcagaataaaaagcatgcagttctccatgttctcgggatcggacatt
ctaaaggctgccgaagtgcaagtatatcaaggcagatactacggttcttctgaaccgata
gaaggcggtttgttggatcttcgcatgggtccaccgaataagggtccaccgaataagggt
acaggagacaaaggttggatatgtgcaacatgtcatggagactttgcacaatgtccgggg
cattatggatatttgagccttgctctacctgtctacaatgttggatatttaagtatgatt
ttggacatcttgaagtgcatttgtaagtcctgttctcgtatacttttggaggaaaaccta
cgtaaagattatttgaagaaaatgagaagcccaaaggtggagcctttgaggaagactgaa
ttgatgaaattggtggtaaagaagtgtaataccattgtaaagtgctcgaggtgcggctat
ataaatggtaaagtgaagaagggtgtatctgccctgggtattattcatgatcgttcaaaa
tcaagtgatgagaatgataaagaatgtaggtttgctgcactttctcacaccaaggagccc
cttagtgctgctacttacatgcttaacccagtcacagtgctctctctttttagaaaaatt
tctaatgaggactgcgaattgctttatatctcagaacgaccagagaaactcattataaca
gttattgctgttccgcctacagttattcgaccatctgttttgatggatggatcacaaagc
aatgaaaatgacattacagaaaggttgaaacgaattattgaagcaaatgctacccttcat
caagagttactggaaacaagtactgcattaaaatctctggcaagttgggatacacttcaa
tttgagtttgcacagtatattaatagtgatgttcgtggtgttccatatcacatgcaagtt
acgaagccgttgagtggtctagttcagcgccttaaagggaagcaaggacgctttcggggg
aacctatctggaaagcgtgttgagtataccggcaggacagttatatcacctgacccgaat
ctgaaaattactgaggtggcgattcccatccacatggctaagcttttatcatatcctgaa
cgtgtttcctgtcacaatattgagaagctaaggcagtgtgtccgtaatggcacttggaaa
taccctggtgcaaaaacagtcagaaaatccgataattcacaaccacattacctattcatg
gactacaggaagcggctagctgacgaacttaaaattggttggatagttgacaggaatttg
gaagatggggacattgttcttttcaatcgacaacctagcctgcatcgaatgtctataatg
tgccacagggctaggattatgccctggagaacgttgagatttaatgaatccgtttgcaac
ccttataatgctgattttgatggtgacgagatgaatttgcatgtccctcaaacagaagag
gctaggacagaggctcttatgttaatgggggtccaaaacaatttgtgcacaccaaaaaat
ggagagatcttggttgcttccactcaagattttctgacgtcatcatttctcataacaagg
aaggacacattctatgatcgtgcgaacttttcacttatgtgttcttatatgggcgatggc
atggatcatatcgatttgccgacacctgcaatatttaagccagttgagctttggactggt
aagcagttgtttaccatacttctacgtccacgtgcaagtttgaaagtgtacctgaatttg
accgtaaaagaaaaaaactacagtaagccagaaaagggagaaagagaaagggaaacaatg
tgtcctaatgatgggtttgtttatttcaagaatagtgagctaatatctggacaattgggg
aaggctactttgggaaatggaaacaaggacggactttactctgttcttcttagagactac
aaggcacacgctgcggcaacttgcatgactcggctggctaagttgagcgctcgatggatt
gggaatcatggtttttcaattgggattgatgacgttcagccaaaagaaaaacttaatgag
gaaaaagggaatacgcttttggttaattatcgaaagtgtgatcggaaaatacacgacttc
aatgaaggaaagctaaaacttcaacctggttgtgatgctgctcaaacacttgaagcggaa
atatctggcatattgaataaaattcgagatttaactgcacgggtatgcatggaaacattg
cattggagaaacagccccttgattatgtctcaatgtggctccaaaggatctcctattaat
attagccaaatggttgcatgtgttggtcagcagtcggttgggggtcatcgtgctccaaat
ggattcatagaacggagccttcctcatttccctagaaaatccaaaacgcctgctgccaag
ggctttgttgctaattcattttatagtggcctgacagcaacagagttcttctttcataca
atggcagggcgagaaggccttgttgatacagctgtgaaaactgctgatactgggtacatg
tctcgtagactgatgaaagcgttggaggacttatccattcaatatgatgacactgtgcga
aatgcaagtggtggcattgtacaatttttttatggagatgatggcatggatcctgctgct
atggaagggaagaatggctttcctttaaattttgaccgattgttaatgaaagtcaaggct
acatgtccagctaaagaagatcgatttctatcagttgacaatatctctgatatagtagaa
gaacaactatcagaacatgaaaaatatttaggtgacggttgttccgaggccttcaaaaaa
tctctacgaggctttttggaaaatcatttgagagaatcaaaacacacaatagagtgtttc
aagaaaaattctgttggagaaaaatctgaggttctagaagaaattgccaataaaatatct
ggggtcacccagaaacagctgaaggtttttctggagacttgcttcacacgatatcgtgca
aaaagagtcgaagctggaactgccattggagcgattggagctcaaagtattggagaacca
gggacacaaatgacactgaaaacctttcactttgctggagttgccagcatgaatataaca
cagggagttcctcgtattaaagaaattattaatggagctaaaaaaatcagcactcccata
attactgcagaacttgaacatggtgataacataaatgctgcacgaatggtgaaaggtcga
attgagaaaacagttttggggcaggttgcgaagagtatcaagattgttatgacttcgaga
ttagcatcaatagtcatcacacttgacatggaaataattcaggatgcacagttgtgtatt
gatgcaaatactgtaagggaatcaattttacagactccaagaataaacctgaatgcagag
tgtgttagggttttggatgtttataagttggaagttttacctcctaaagctgaagctggt
aaaagtggagtccattttcaactccactctcttaaaagtgtgcttccgtttattaatgtg
aagggtataaaaagtgtcgaacgtgctgttattgctgagaaagagaaaaagaagggtgaa
gagatccagagattcaatgttttggtagaaggcaatggtcttcaagatgtgatgggtaca
gaaggagtagacgggcgtaatacaaagagtaatcacgtcattgaagtgcagcagatactt
ggaattgaagctgcaagaaagtgtattatcgatgagataaagcaaaccatggaatgtcat
ggaatgagcattgatatacgtcatatgatgcttttggcagatgttatgacatctaggggt
gaagtgcttggaatcacaagatttggcgttcaaaagatgggtaaaagcatattgatgctg
gcttcattcgagagaacatcagatcaccttttcagtgcttctgtaaatgggagggatgac
aagattgagggagtaagtgaatgcataatcatgggcattccaatgcagattggcacagga
ataatcaaagtcatgcaaagagtagattcaactccaatgttgacttatgggtcagatcct
attttatcttga
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