KEGG   Tripterygium wilfordii (thunder duke vine): 119991649
Entry
119991649         CDS       T07256                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:twl03036]
    119991649
   03400 DNA repair and recombination proteins [BR:twl03400]
    119991649
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    119991649
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119991649
SSDB
Motif
Pfam: MMS19_N MMS19_C ELMO_ARM HEAT_2
Other DBs
NCBI-GeneID: 119991649
NCBI-ProteinID: XP_038693957
LinkDB
Position
22:3472498..3485437
AA seq 1149 aa
MVEQSQFTRHIELFIDSSCSVMQQTASVDAIALLLKNNVLTLEALVKELGMHLTTTDNII
RARGILLLGEVLIHLSSKLLDNATIHNLITFFTDRLADWKALRGALVGCLALMQRESIAG
MVSESDAKALGQSYLQNLQVQSLGQHDRKLCYELLQCLLESYPDAAASLGDDLLYGICEA
IDGEKDPQCLMLGFHLVEVLPQLFPDSSGLLENFSSSLFEVLGSYFPIHFTHPKSEDACL
KRDDLSNALMLAFSSTPLFEPFSVPLLLEKLSSSLPSAKVDSLKYLSNCTLKYGGDRMAK
HAGSIWSSLKDAISSSLQVSGLSFVAEALNDQGSQENEITREALKLLEKVVMQNTDVYFS
LLASDEDVKMIFNVISHCKKYSEIPLQSKQRLHAVALILSAFTKASVASCNRIFESYFPC
LMDNLGLSVENSYVAYKSNENCVVPENLNFGALYLIIELLGACRDLITSSGELVLETTYV
HEKWGYLLQSFSISLSKMVSSILATTDGHTQEAYIYLGVRGLQILAMYPGECSLVSKSTF
ESILMTFISIVSMDLSKTLLWKLALKSLVHIASFLNRWHESEKAQIYTSVVVDKIVSLVY
LDDFSMPVPLKLEAISDVGTSGLNYMLKIVEGLGEAICAKLQRVYGDGDTKSAVIIVQLL
ECFSDKLLPWMQENGGCEESILRFVVCIWKQIENCVALSVGIHEKGLLVSITKAMKLAVG
CCSAESQTIIVEKAYNVISARSCFPYNESTFCIPMELEGLQLTQEMGNFAGRDGWILSLF
ASVIIALHPQVHIPNLKALFRMFMIALLKGHIPAAQALGSIVNKFGQKSNGMEISGDCTL
EEAMEIIFCTSFHRSHENGPVNRCDQVSNGNDVGLTGLCLGAANNTMLQIHSIVGLAWIG
KGLLMRGHEKVIDITKVLVESLQSHGRTDILPLKQVSSDNGLDHDSCVMKCAADAFQIFM
SDSEHCLNRKFHAIIRPLYKQRFSSTIMPILQSLILKSDVSSSRLLLYRAFAHVISNTPL
IVILSDAKKLIPMLLDGLTVLSKDSVDKDIVYSLLLVLSGVLTDSNGQEAAIENARIIIN
GLTRLIDYPHMMFVRETAIQCLVALSGLPHARIYPMRMQVLQALSKSLDDPKRFVRQEAV
RCRRAWSML
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggtagaacagagtcagttcacccgacacattgaattgttcatcgactcgtcctgctcc
gtgatgcaacagactgcaagtgtggatgcaattgccttactcttgaagaataatgtgtta
acgttggaagcactggttaaagagttgggaatgcatttgaccacgacagacaacataatt
cgtgctagaggtatccttcttcttggggaagtgcttatccatctttcatcgaagctactg
gacaatgccactatacataacttgataacatttttcactgatagattggcagattggaaa
gctttgcgtggcgcactcgttggctgtttggctttgatgcaaagggagagtattgcaggt
atggtctctgagagtgatgcaaaggctcttggacaatcttatttacagaaccttcaggtg
cagtctttgggacaacacgacaggaagctttgctatgaactgttacaatgcctattagaa
tcctatcctgatgctgctgcctctctgggtgatgacctcctttatggaatctgtgaagct
attgatggagaaaaggatcctcaatgcttaatgctaggttttcaccttgttgaagttctt
ccacaattatttcctgattcatctggattgcttgaaaatttttctagcagcctttttgag
gtcttggggagttactttcccattcattttacccatccaaaatccgaggatgcttgtctg
aagagggatgatctctcaaatgcactaatgttggcattttcttcaacccccctttttgag
ccattttctgttcccttgcttcttgagaaactttcttcctctctcccgtcagcaaaggtt
gattctctgaagtatctcagtaattgcacactgaagtatggaggagacagaatggcaaaa
catgctggatctatttggtcttcactaaaagatgcaatatcttcttcgctgcaagtttct
ggtctttcctttgttgcagaagcactcaatgatcaaggctctcaggaaaatgagattaca
agggaagccctaaaacttcttgagaaggttgtcatgcaaaatactgatgtctacttcagt
ttgcttgccagtgatgaagatgtgaaaatgattttcaacgtgatttcacattgtaagaaa
tacagtgaaatccccctgcaaagcaaacagagactacatgctgttgctcttattctttct
gcttttactaaggcttctgttgcctcctgcaatagaatatttgaaagttacttcccttgc
ctgatggataatctggggctttcagtggaaaactcatatgtggcctacaagtcaaatgag
aactgtgtggttcctgaaaatcttaattttggagctctttatctcatcattgaacttctt
ggggcatgcagagatctgattacaagttctggagagctcgtattggaaactacttatgta
catgaaaaatggggctacttgcttcaaagcttttctatttctttaagcaagatggtcagt
tctattttggcaactactgatggccatactcaggaggcatatatttatcttggagtgaga
ggtttgcagattctggctatgtatcctggagaatgttcattagtgtcgaaatccacattt
gagagtattttgatgacattcatatcaattgtctccatggatttgagcaaaacattgttg
tggaaactggctctgaagtcgctagtacatattgcctctttcctcaatagatggcatgag
tctgagaaggcacagatctatacaagtgttgttgttgataagatcgtctccttggtttat
cttgatgactttagtatgccggttcctctcaaattggaagccatctctgacgttggcaca
tctgggctgaactatatgctgaaaattgttgaaggattgggtgaagctatatgtgccaag
ctacagagggtctatggggacggagataccaagtcagctgtaatcattgttcagctcctt
gagtgcttctctgacaagttgcttccatggatgcaagaaaatggaggttgcgaagaatcc
atattgagatttgttgtatgtatttggaagcaaatagaaaactgtgtggctttgagtgtt
gggatccatgaaaaaggccttcttgtctcaatcacaaaggcaatgaagcttgctgttggg
tgttgttctgcagagagccaaaccataatagttgagaaagcttacaatgtaatatcagcc
agaagttgttttccatataatgaatctacattctgcattccaatggaactggaagggtta
caacttactcaagagatgggaaactttgccggcagagatggatggattttatcattattc
gcatcagtaattatagcacttcatcctcaagtgcacataccaaatttaaaagctttgttt
cgtatgttcatgattgcgctcctcaagggtcacattccagctgctcaggctttggggtca
attgttaataaatttggccagaaatccaatggaatggagatttctggcgattgtacattg
gaagaagcaatggagataattttctgcactagttttcatcgttcccatgaaaatggtcct
gtaaaccgatgtgatcaagtgagcaatggtaatgatgtgggccttactggtctatgcctt
ggtgctgcaaacaatactatgctccagattcattccattgttgggttggcatggattgga
aaaggtttgcttatgcggggtcatgaaaaagtgattgacataaccaaggtcttagtagag
tccttacaatcacatggcagaacagatatcttgccattaaaacaagtatcctcagataac
ggtttggaccatgattcctgtgtgatgaaatgtgcagcggatgcttttcaaatttttatg
agtgactctgagcattgtttgaacaggaaatttcatgcaataatacgaccactttataag
caacggttttcctccacaataatgcccattcttcagtctttaatcctgaaatcggacgtg
tcatcgtcaagattgttgctgtatcgtgcttttgcgcatgtcatatccaatactccacta
attgtgatcttaagtgatgcaaagaagctaattccgatgttactggatggcttaaccgtg
ttaagcaaggatagcgtggataaagatatcgtctatagtctcctgcttgtcttgtctgga
gtattgacagatagtaatggacaagaagctgctattgagaatgctcgtattatcattaat
ggcctcaccaggcttatcgattatcctcatatgatgtttgttcgagagacggctattcag
tgtcttgttgccttgtctgggctgcctcatgctaggatttatcctatgcgaatgcaggtg
ctacaggctttatcgaaatctcttgatgatccaaagaggttcgtccgtcaagaagctgtt
agatgccggcgtgcatggtcaatgctttag

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