Tripterygium wilfordii (thunder duke vine): 119991668
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Entry
119991668 CDS
T07256
Name
(RefSeq) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119991668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119991668
Spliceosome [BR:
twl03041
]
Complex B
Other components
Prp19-related factors
119991668
Complex C
119991668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_12
zf-CCCH
zf-CCCH_3
RRM_3
RRM_YTH1
zf-CCCH_4
zf-CCCH_PARP12
zf-CCCH_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119991668
NCBI-ProteinID:
XP_038693989
LinkDB
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Position
22:complement(10188175..10193781)
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AA seq
489 aa
AA seq
DB search
MAHRLLRDYEADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGR
DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTTLSINSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYVRGECTRGAECPYR
HEMPMTGELSQQNIKDRYYGVNDPVALKLLGKAGEMPSLEPPEDESIRTLYVGGLDARIT
EQDLRDNFYAHGEIESVKIVIQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGK
PQALRSESEGSDEARHQAALAHGGMLPRAVISQQQNQLQPGNQDQLPPMPYYNIPPPPQQ
ERNFYPSMDPQRMGALVPSQDGAPNGPAGSGENKSGSEKQQQAQHYTHQAMPPPHGQYHG
QPYPPYGYMMPPPPPLYQQYPPQYPPTMPPQQGAHMTQQYQHSGPPRAVPPASTGPSTSA
STAPGSTQL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatagactgttaagagattacgaggccgatggatgggaacgctcggatttccct
ataatctgcgagtcgtgcctcggcgacaatccgtatgttcgaatgacaagagcagattat
gacaaagagtgtaagatatgcacacggccatttactgtttttaggtggaggcctggtcgt
gatgcaagattcaagaaaactgaggtttgccaaacatgtagcaagttgaaaaatgtttgt
caagtctgtctcttggatcttgaatatgggttaccagttcaggttcgagatacaacactc
agtatcaattccaatgatgccattccgaagagtgatgtcaacagggaatattttgcggag
gagcatgaccgtagggctagagcgggtattgattacgaatcatcttatgggaaggtgcgg
ccaaatgacactattttgaaacttcaaagaacaacaccgtactacaaaaggaaccgagct
catatatgcagtttttatgttcgtggtgaatgcacaagaggggctgaatgcccctataga
catgagatgcccatgacgggggagttatcgcagcaaaatataaaagatcgttactatggt
gttaatgatcctgtagcgctgaagctgcttggcaaggctggtgaaatgccttcgctggaa
cctccggaggatgaaagcattaggactctgtatgttggtggccttgatgcaaggatcact
gaacaggatttaagggataacttttacgcgcatggtgaaattgaatccgtaaagatagta
attcaacgagcatgtgcgtttgtgacctacacaaccagagaaggagcagaaaaggctgca
gaagagctctctaacaaactcgtaattaagggtttgagactgaagctgatgtggggtaag
cctcaagcattgagatcggagtctgaaggctcagatgaagcaaggcaccaggcagcattg
gcacatggaggtatgttgcctcgggcagtcatatctcaacagcagaatcagttgcaacct
gggaaccaggaccagctaccaccaatgccgtactacaatattcctcctccaccccagcag
gaaagaaacttttatccgtcgatggatcctcaaaggatgggtgcgcttgttccatctcaa
gatggggctcctaatgggcctgcggggtctggtgagaataaatctggatctgaaaagcag
caacaggctcagcattatactcatcaagctatgccaccacctcatggacaataccatggg
caaccttatccgccatatggatatatgatgccacctccgccgccgctctatcagcagtac
ccaccacaatacccccctacaatgccaccacagcagggtgcacatatgacacagcagtat
cagcattctggacctccaagggctgtaccaccagcgtccaccgggccttcaacatctgca
tccacagcgccagggtcgacccaactttga
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