Tripterygium wilfordii (thunder duke vine): 119991689
Help
Entry
119991689 CDS
T07256
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119991689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119991689
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119991689
mRNA cycle factors
Common to processing body (P body) and stress granule
119991689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
119991689
NCBI-ProteinID:
XP_038694021
LinkDB
All DBs
Position
3:9431465..9437961
Genome browser
AA seq
1043 aa
AA seq
DB search
MMTVPMNNYLDLSSSERVQSLFHKNVELENSRKKAAQARIPFDPNVWQQIRENYEAIILE
DHVFAEQHEVEYALWQLHYRRIEELRAHLNAARASSHSDMPQGGKVSSRPERVTKIRSQF
KAFLSEATGFYHDLMLKIRTKYGLPLDFFSDGPESRNVVSRDGNKSTEMKKGMISCHRCL
IYLGDLSRYKGLYGEGESKTRDFAAASSYYMQAASLCPSSGNPHHQLAILASYSGDELVA
IYHYFRSLAVDNPFSTARDNLIIAFEKNRQSFLQLLESAKASSVRNAPVRMNGRGRGRGR
GRGRGSGRGRGAVISVKDDKMGASTVKENPSNMPEILKAFSTCFVRLNGILFTRTSLEKF
VEVLSVVRGDLLKLLSSGSEEKCNFGSGASDNGLMIVRLVAILIFTAYNANRETENQSYA
EILQCSVLLQNACTAIFEVMGLIVERCMQLQDPLTSFLLPGVLIFLEWLACQPDIAAGSE
VEEKQATARSFFWKSCVSLLNKLLTSGLMSINEDKDDAFFSNMSTYNECETTNRHALWED
FELRGFVPLVPAQLILDFSRKQSSENDGGDGEIRARLQRIVAAGKSLASVVHVGKLGMYF
DLRVKRFAIGVEPQSGKDFDFVLSSSCEMSACDRVIKIEHIGELEHIGEQKLGTEDLQLK
SQLYTEMEEEDEVIVFKPSTIDKRVDFDGSKLSSAEVFGPGGISSQGDLESCVASVSASQ
DGFVVLNDLSSKAPISSATIPQFVPSLNSFHTGSSMSLAAPQDVQLLNTIDTSLRVPASL
ANLSQHVQPIQPSASKWLLESENSIANGLRELNLVENGLVTKPRLQESFGVSQPAALPFP
FPHAVNDSSGKAHPIQVSDTVIPSKLDSVVPLGANFNSLTSSALPANKTKNPVSRPSRHV
GPPPGFNPVPPKSACVSFSDIGLNDNLKADGYSWLDGYQLPSSTKVSGGTNSSSLSTQSH
HHVTVGSSPTGATSFPFPGKQFWSLQAQSESHRSVQDYQVLDHLKLYQEQQLEQQLLKKV
NRQSGQPPEHYWGQLPREGRFFV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagttccaatgaataattacttggatctttcatctagtgagcgtgttcaaagt
cttttccacaagaatgttgagttggagaatagccgcaaaaaggctgcgcaggccaggatt
ccctttgatcctaatgtctggcaacaaattcgagaaaactatgaagccattatccttgaa
gatcacgtctttgctgaacaacatgaagtagaatatgctttgtggcagttgcattatcgg
cgaattgaggagcttcgagcacacctcaatgccgctcgtgcttcatctcattcagacatg
cctcaaggtgggaaagtatctagtcgacctgaacgagttactaaaattcgttcacagttc
aaagcctttctttctgaggcaactggcttttatcatgatctgatgttgaaaattagaacc
aagtatggtctgcctcttgatttcttctctgatggtcctgagagccggaatgttgtgtct
agagatggaaataaatcaaccgagatgaagaaaggaatgatttcctgccatcgttgtctg
atttacctgggtgacctttctcgttataaaggtttatatggggaaggtgagtctaaaacc
agagattttgctgcagcatcaagttactatatgcaagctgcttccctttgtccttcaagt
ggcaatcctcatcatcagcttgcaatactggcttcctattcaggggatgaattggtggca
atataccactactttaggagtttggcagttgataaccctttttcaactgccagggacaac
ttaattattgcatttgagaagaatcgtcagagttttttgcagcttcttgagagtgcaaaa
gcttcatcagttaggaatgcaccggtgagaatgaatggaagagggagagggagagggaga
gggagagggagaggaagtggaagaggaagaggtgcggtgatttcagtgaaagatgataaa
atgggagcaagtactgttaaggaaaatccatctaatatgcctgaaattcttaaagccttc
agcacttgttttgttcgactaaatggtattctgtttactcgcacaagcttggagaagttc
gtggaggttttgtctgtggtgagaggagatctgcttaaacttctctcatcggggtcggaa
gaaaagtgtaattttggttctggtgcttcagataatggtcttatgattgttaggcttgta
gccattcttattttcactgcttacaatgcaaatcgggaaactgagaatcagtcatatgct
gagattttacaatgctcagttctgcttcaaaatgcctgtactgctatttttgaggtcatg
gggctcattgttgagagatgcatgcaacttcaggatcctttgacaagctttcttttgcct
ggtgtgctgatctttctggagtggttggcttgtcaaccagatattgcagctggcagtgaa
gttgaggaaaagcaagctactgctagatcattcttctggaagagttgcgtctctcttttg
aataagcttctgacaagtgggctcatgtcaattaatgaggacaaggatgatgcatttttt
tccaacatgagcacctataatgaatgtgaaaccacaaatcggcatgcactatgggaggac
tttgaattgagaggatttgtgcctcttgttccggcacaactaattcttgacttttcaagg
aagcagtcttctgaaaatgatggtggagatggagagataagagctcgacttcagaggatt
gtcgcggctgggaagtctcttgccagtgtggtccatgttgggaagctgggcatgtatttt
gatttaagagtgaagagatttgcaattggcgttgagccgcaatcaggaaaggactttgat
tttgtgttgtctagttcttgtgaaatgtccgcatgtgatagggtgattaagattgaacat
attggcgagcttgaacatattggtgagcagaaattgggtacggaagatttacagctgaag
tcgcagttatatacagaaatggaagaggaagacgaggtcattgtttttaagccttctacg
atagataagcgtgttgattttgatggctccaagctgtcttctgctgaggtttttgggcct
ggtggtatttcttcacagggtgatttggaaagctgtgttgcatcggtgtcagcctcacaa
gatggttttgtagtgctgaatgatttaagctcaaaggcacccatatctagtgcgaccatt
ccccagtttgtgccatcgctgaatagtttccacacggggtcctctatgtctcttgctgct
cctcaggatgttcaattgctaaatactattgatacaagcttgagggttccagcgtctctt
gctaacctctcccagcatgtgcaaccaatccaaccaagtgcttcgaagtggctgctggaa
tctgaaaattccattgccaatggattgagagaattgaatttagtggagaatgggcttgtt
acaaaacctcgattgcaagaaagctttggagtttcgcagccagctgcacttccgttcccg
ttcccacatgctgtgaatgacagttctggaaaggcacatcccattcaggtttctgatact
gttataccttctaaattagattcagtcgtgcctctcggagccaactttaatagtcttacg
tcttcggctttgccagcaaataaaacaaaaaatccagttagccgaccatcacgacatgtt
ggtcctcctcctggatttaaccctgttcccccaaaatctgcatgtgtgtccttctctgac
attggtttgaatgataatttaaaagcggatggttatagttggctagatggatatcagttg
ccatcatccacaaaagtcagtgggggtaccaattccagcagtctttcgactcaatcccac
catcatgtgacagtgggcagcagtccgactggggcaacaagcttcccatttcctggaaaa
cagttttggtctttgcaagctcaatcagaaagtcatagaagtgttcaggactatcaggtt
cttgatcatctgaaactttaccaggagcagcagctggaacagcagttacttaagaaagta
aatcgccaatctggtcaaccgccagagcattattggggacagcttcctcgggaaggtcgt
ttctttgtgtga
DBGET
integrated database retrieval system
