Tripterygium wilfordii (thunder duke vine): 119991813
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Entry
119991813 CDS
T07256
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119991813
Membrane trafficking [BR:
twl04131
]
Protein recycling
Others
EARP complex
119991813
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
119991813
NCBI-ProteinID:
XP_038694222
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Position
22:complement(11477278..11491542)
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AA seq
1138 aa
AA seq
DB search
MQPNPFPFASVIGNSFLFSNGGEVSETGFAGSRVFFFLPFLLSQGGDMDLSKVGEKILSS
VRSARSLGLLPPAPDRPEVPARAAAAAVVARALAGLPPHQRYNLPSSSEELRSIYGSKPY
GQDHVVEELEEQFYEEDFDPVGFILEHIPSGENELEYFEKQAALRLAQLDGVAERLSLHV
MEHHEVMVKGMHLVREVEKDLKVANVICLNGRRHLTSSMNEVSRDLIVNSNSKKKQALLD
ILPLLTELRHALDMQTALESLAGEGNYCKAFQVLSEYLQLLDSFSELSAIQEMSRGVEVW
LGRTLQKLDSLLLAVCQEFKGEGYITVVDAYALIGDVSGLAEKIQSFFMQEVLSETQSVL
KSIVQEDQEAKMQNSRLTYSDLCLQIPESKFRKCLLRTLAVLFRLMCSYYEIMNFQLENQ
VSACQSSSTKENCDTSSNSGEIQKSDSVTKISCNDPGNNDSISESVNGTSGSSYTEELTR
NISLTDPLRTTDSSSIESHHPVDVAGNDSDEPSSSGSPWYQLRSDATAFVSQTLLRGRKN
LWQLTTSRVSVLLSSTAVGSTSIHQFLKNYEDLNVFILAGEAFCGVEAIEFRQKLKAVCE
NYFAAFHRQSAYALKMVLEKESWLTLPPDTIEVISFAGLVGDGAALIIPSNSNSTNARVL
HTDKLVNSVDSAYKKSGFTHWLKSGNPFILKLTHASREGQSPILNGKISGDYDGDVNVNF
LGDKFSPKKADVNHMNGATGSEDENEDLLADFIDEDSQLPSRISRPNVSSSRSSHRIADE
ITAQTGSSLCLLRSMDKYARLMQKLEAVNIEFFKGICQLFEFFFYYVFETFGQQNTTSSG
RSSTDVLNYRLKTALSRIMQDCDQWIKPQSGPFSSASPTSLNTSFVRADVTPTSPSNTNF
GHLQGTSFGLKERCAGVETISLVAQILHRSKAHLQSMLLQKNPVMVEDFYVHLVDSVPDL
AEHIHRTTARLLLQINGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIN
KEVQDQLLEYGVEIVAETLVEGLSRVKRCTDEGRALMSLDLQVLINGLRHFVPVNVKPKL
QIVETFIKAYYLPQTEYVHWVHAHPEYSKNQIVGLINLVAAMKGWKRKSRLEVLEKIE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaatccgttcccattcgctagcgtgattggtaattcgtttctgttttccaat
ggtggggaagtgagcgagactgggtttgcggggtctagggttttcttctttctcccgttt
ttgttgtcccaaggaggcgacatggatctttccaaggttggtgagaagattttgagttct
gttcgatccgctagatcgcttggcctcttgcctcccgctcctgatcgtccggaggttcca
gctcgagctgcagctgctgcggttgtcgcccgtgcactagcaggattgcctcctcatcag
aggtacaatctcccatcaagttctgaagaactgcgatcaatatatggaagcaaaccgtat
ggtcaagatcatgtggtggaggagctagaggaacagttttatgaagaggactttgatccg
gttggctttattttagagcatataccatcaggagaaaatgagttggaatattttgagaag
caggctgctcttaggttagcacaactggatggagtggcagagcgattgtccctccatgtt
atggagcatcatgaagtaatggtgaaggggatgcatttggtgagagaagtggagaaggac
ttgaaggtcgccaatgtcatctgcttgaatggaagaaggcatcttacttcatcaatgaat
gaagtttcaagggatttaattgtaaattctaattctaaaaagaaacaagctcttctggac
attcttccactattaactgagcttcgtcatgcattggacatgcaaacagctctagaatcc
cttgctggagaagggaactactgcaaggcatttcaagtcctatctgagtatttgcagctg
ttagatagtttttcagagctttcagcaatacaagagatgagtcgtggtgtggaggtttgg
ctgggaagaactctacaaaagctcgattcacttttgttggcagtatgccaggaattcaag
ggggagggttacattactgtggttgatgcatatgcgctcataggtgacgtttctggtctt
gctgagaagatacaaagcttcttcatgcaggaagttctctccgaaactcagtctgtgttg
aagagtattgtgcaagaggaccaggaagcaaagatgcaaaatagcaggctgacatatagc
gatctgtgccttcagataccagaatccaagtttcggaagtgtttgctgagaacactagct
gtcttgtttagattgatgtgctcatattatgaaatcatgaactttcagctcgaaaatcag
gtttcagcatgtcaaagttcaagtaccaaggagaactgtgacacctcttcgaattcagga
gagattcagaaaagtgattcggttacgaaaatttcttgtaatgacccaggaaataatgat
tctatttcagaatctgtaaatggaacttctggttcatcttatacagaggaattgactaga
aatatctctttgactgatcctctaagaactacagattcctcatctatagaatctcatcat
ccagttgatgtagctgggaatgatagcgatgaaccatcaagcagtggatccccttggtat
cagctgcggagcgatgcaacggcctttgtgtcccaaactcttcttagaggacgcaaaaat
ctttggcaactcacaacaagtcgagtctcggtgttgctatcttcaactgctgttggttca
acaagcattcaccaatttttgaaaaattatgaagatctgaatgtctttatcttagctggg
gaagccttctgtggagttgaagcaattgagttcaggcagaagttgaaggctgtttgtgaa
aattattttgctgcgtttcataggcaaagtgcatacgcacttaaaatggttttggaaaag
gagagctggctgacattgccaccagatacgattgaggtaatcagttttgctgggcttgtt
ggggatggagcagcactaatcattccatcaaacagcaactctactaatgccagggtactt
cataccgacaaattagttaactcagttgattctgcttacaagaagagtgggtttacgcat
tggcttaaaagtggaaatccttttatattgaaactaacacatgcttctagagagggccag
agtcctatactaaatgggaaaatctctggagactacgatggggatgtaaatgtcaatttt
cttggtgataagttttctcccaaaaaggctgatgtaaatcatatgaatggtgctactggc
tcagaagatgaaaatgaagatcttcttgcggactttattgacgaggatagtcaacttcca
agtcgaatatctagaccaaatgtttcaagctctcgctcttcacataggattgcagatgaa
atcacagcacaaacaggatcatctctttgccttctaaggtcaatggataaatatgctagg
cttatgcagaaattagaagctgtgaatattgagttttttaagggaatatgccagttattt
gagtttttcttctactatgtatttgaaacatttggccagcaaaatactacctctagtgga
aggtcttcaactgatgttcttaattatcgtttgaagacggctttatccagaataatgcaa
gattgtgatcagtggataaaaccgcagtcgggacctttttcatctgcgtcaccgacatct
ttgaatacatcgttcgtacgtgctgatgtaacacctactagtccctctaatacaaacttt
ggtcacttgcaaggcacgtcttttggcctcaaggaaagatgtgctggtgttgaaaccata
tctcttgttgctcaaatattgcatagatctaaagctcatctacaatcaatgcttcttcaa
aaaaatccagtaatggttgaagatttctatgtacacctggtggattctgtaccagatctt
gcagagcacatacacagaacaactgcaagattactactacagattaatggctatgttgat
cgaattgctaatgcgaaatgggaagtgaaagagcttgggctggaacataatgggtatgtg
gatttgttgttgggcgaatttaagcactataagacaaggcttgctcatgggggaatcaat
aaagaggttcaggaccaactcttagaatatggagttgaaatagtggctgaaactcttgtt
gaaggtctctcaagggtgaaaaggtgcactgatgaaggacgtgctctcatgtcgttagat
cttcaggttctaatcaatggtctacgacactttgtacccgtaaatgtaaaacccaagtta
caaatagttgagactttcattaaggcttactatcttccacaaactgaatacgtgcactgg
gttcatgctcatccagaatacagtaaaaatcagatcgtggggctaataaaccttgttgct
gcaatgaaaggctggaagaggaaatcccggttggaggtacttgaaaagatagaatga
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