Tripterygium wilfordii (thunder duke vine): 119991886
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Entry
119991886 CDS
T07256
Name
(RefSeq) polyadenylate-binding protein 7
KO
K13126
polyadenylate-binding protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119991886
09123 Folding, sorting and degradation
03018 RNA degradation
119991886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119991886
03041 Spliceosome [BR:
twl03041
]
119991886
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119991886
mRNA cycle factors
Stress granule specific factors
119991886
Spliceosome [BR:
twl03041
]
Complex C
Other components
Complex C specific factors
119991886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
Nup35_RRM_2
RRM_3
RRM_RdRP1_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
119991886
NCBI-ProteinID:
XP_038694331
LinkDB
All DBs
Position
3:10717503..10722790
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AA seq
633 aa
AA seq
DB search
MAIPSAVVGQSTASIYVGDLHPDVTDGQLADIFAEFKSITSVRLCRDSTTGRSLCYGYVN
FVSQQDAVHAIETKNHMVLNGKAIRVMWSQRDPDTRKMGVGNVYVKNLVDSIDNAGLQDL
FRKFGNILSCKVAISVEGKSKGYGFVQFETEESANAAIEKLNGFTAGGKQIFVGKFIRKS
DRILTGLDAKYTNLYVKNLDSDVTEELLQNKFSKFGKIVSLAIAKDDSGASKGFGFVNFE
NPDDARRALGAMNGLDLGSRILYVARAQKKAEREQILRHQYEEKRKEKMLKYQGSNVYVK
NIDDDVTEEELREHFSQCGAITSVKLMRDEKGISRGFGFVCFSSPEEAAKAVNTFHGYMF
HRKPLYVAIAQRKEERQAQLQLHFAQRMASLAGPSATVIPGAYPPFYYTAPGVVSQVPGP
GLMYQPLGMRPGWRSNGFAPPTRPGFQPSSFPAVLNGPRHQRQNRGRVNGQSHIQVGAHS
VAYMPHLQQPTQSVTSSKDLNNQQVKYVPNGRSREVNIGSAILPAAPHSAGTASQELESL
SSMLAAASPDQQKQILGERLYPLVQKHKPDLVAKITGMLLEMDNSELLLLLESPESLAAK
VEEAVQVLKLSKTKSSGQDSLHPSYLSAEVAVN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccatcggcggttgtggggcaatcgacggcgtcgatttacgtcggagacctt
caccccgacgtcaccgatggccagctcgccgatattttcgccgagtttaagagcatcact
tccgtgcgcctctgtcgcgactccaccaccggtcgctccctctgttacggttacgtcaac
ttcgtgtctcagcaggacgctgttcatgcaatcgagacaaaaaaccatatggtgctgaat
gggaaagcaataagagttatgtggtctcagcgtgatcctgacacaagaaaaatgggagtc
gggaatgtttatgttaagaacttggtcgactcgattgacaatgctgggttacaagatctg
tttaggaaatttgggaatatactctcatgcaaagtagctatttcagtggagggaaagagt
aaagggtatggttttgttcaatttgagactgaagaatctgcaaacgctgctattgagaag
ctgaatggcttcactgctggtggaaagcaaatatttgttgggaagtttataagaaagagt
gatcggattttgactggtcttgatgccaaatatacgaatttgtatgtgaagaacttggat
tcagatgtgacagaagagcttctgcaaaacaagttttcaaagttcggaaaaattgtgagc
ctggcgattgcaaaggacgatagtggtgcctccaaaggttttggctttgttaattttgaa
aacccagatgatgccagacgagcactgggagcaatgaacggattggaccttggctcaagg
attttgtacgtggcaagggcacagaagaaagcagagcgcgagcaaattttacgtcatcaa
tatgaggagaaacgtaaagagaaaatgttaaaataccagggttcaaatgtgtatgtgaag
aacattgatgatgacgtcactgaagaagagctgagagaacacttcagtcaatgtggtgca
attacttcagtgaaacttatgcgagatgagaaaggaataagtagggggtttggttttgtg
tgtttctccagcccggaggaggcagctaaagctgtgaatacttttcatggatatatgttc
cataggaaaccattatatgtggctattgcacaaaggaaagaggagagacaagctcaacta
cagcttcattttgcacaacgtatggctagtctagccggtccttctgctactgtcatccct
ggtgcctatcctcctttttattatacagctcctggtgttgtttcacaagttcctggtcct
gggttgatgtaccagcctttagggatgaggcctgggtggaggagtaatggctttgcacct
ccaacaagaccgggatttcagccgtcatcatttccagctgttcttaatggtcccagacat
cagaggcaaaacaggggtagggttaatgggcaatcacatatacaagttggtgctcactct
gttgcatatatgccacatctgcaacagcccactcaatcagtgacttcttcaaaagacttg
aacaatcagcaggtaaagtatgtaccaaatggtcgttctcgtgaagtgaatattggatct
gccatcctgcctgctgctccccattcagctggaactgcatctcaagaattagaaagtctg
agcagcatgcttgcagctgcttctcctgatcagcagaagcagatacttggcgaacgtctt
tacccacttgtccagaagcacaagcctgatctagttgcaaaaattacgggaatgcttttg
gagatggacaattcagaattgcttttgttattggagtcccccgagtctttggcagccaaa
gtggaggaagcagtgcaggtgctcaagctctcaaagacaaaatcatccggccaagactcc
cttcacccgagttacctatctgctgaggttgctgttaactga
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