Tripterygium wilfordii (thunder duke vine): 119991900
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Entry
119991900 CDS
T07256
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119991900
04121 Ubiquitin system [BR:
twl04121
]
119991900
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119991900
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119991900
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119991900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
Zn_ribbon_PaaD
FAR1_N
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
119991900
NCBI-ProteinID:
XP_038694363
LinkDB
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Position
22:10356786..10358416
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AA seq
381 aa
AA seq
DB search
MSSPSMGSYWCYSCTRFVSIGAHSDTAEADDDAITCPYCDGGFVEEIDEMRPDNSGSDLS
RRFPASALHVISNSNSEDPGQAPARRSRRSRRNANGRSPFNPVIVLRVPADAGDDESNSF
ELYYDDGAGSGLRPLPTTISDFLMGAGFDRILESLTHIEMTNLHRTRNPPASKAVVESMP
RIEITDTHVSTDIHCAVCKEPFELHSEGREMPCKHIYHPDCILPWLSMRNSCPVCRHELP
TEPEEASATATEQEEIVGLTIWRLPGGGYAVGRFSGGRRGGDTELPVVFTEMDGGFNRGE
TSPMVPWVTTRRSRNGGFRGLYRGLASFFGRFRSRSNSSSSPGSVSLSSGSMRRSFSLSN
SVFGRRRRRGLDLEGGEIERW
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccgtcgatggggtcgtattggtgttacagttgtactcgcttcgtaagcatc
ggggctcacagcgacaccgccgaagccgacgatgatgctatcacgtgtccgtactgcgat
ggtggattcgttgaagagattgatgagatgaggccagacaattctggcagtgatctcagc
cgtcgatttccagcttccgcccttcacgtgatcagtaacagtaacagtgaagatcctggt
caggccccagctcgtcgatcacgcagatctcgccgaaatgcgaatggtcggtctccgttt
aaccccgttatcgtcctccgcgtacccgccgatgccggtgacgatgaatcgaacagtttt
gagctgtactacgatgacggagccggatctggcctgagaccgctcccaacgacgatatcg
gatttcttgatgggagcaggattcgatagaatacttgagtcgctgactcacatcgaaatg
accaatttacaccgaacccggaatccgcctgcatcgaaagcggtcgtagaatctatgccc
agaatcgaaattacagatacccatgtcagcacggatattcactgcgcagtgtgtaaagaa
ccatttgaattacattctgaagggcgtgagatgccctgcaagcacatatatcatcccgac
tgtatcctcccatggctttcaatgagaaattcatgtccagtttgtcggcacgaattgcct
acagagccagaggaggcctctgctactgcaacagagcaagaagagatagtggggttgaca
atctggagattgcctggaggtgggtatgctgtgggaagattcagtggaggaagaagagga
ggtgatacggagttaccggttgtgtttactgagatggatggggggtttaataggggagag
acgtctccaatggttccatgggtgaccactagaagaagtaggaatggtggttttaggggg
ctttatcgtggtttggcatcattttttggaagatttagatcgaggtctaattcttcgtcg
tcacctggttctgtaagtttaagttctggatcaatgagaagaagttttagtctttcgaat
tcagtctttggtagaaggagaaggagaggattggacttggaaggaggggagattgagagg
tggtga
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