Tripterygium wilfordii (thunder duke vine): 119991990
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Entry
119991990 CDS
T07256
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119991990
03015 mRNA surveillance pathway
119991990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119991990
03041 Spliceosome [BR:
twl03041
]
119991990
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119991990
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
119991990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
119991990
NCBI-ProteinID:
XP_038694484
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All DBs
Position
22:complement(10284035..10290294)
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AA seq
835 aa
AA seq
DB search
MSGGFFRGTSSEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVIRPWIANRVTELL
GFEDEVLINFIYGLLDGKEVNGKEVQIPLTGFMEKNTVKFMKELWTLLLSAQGNASGIPQ
QFLDAKEEEARKKKAEADRIANEIQKKKENESRELGQERLRKMDNGVEMKANIADLEHTS
RHLPRRSSSIRSGDDKETNRRNGFSGRSRDSRSPHSVDNSFASHWASQSRSTSKSLSCSR
SDSSDRHKSRSSSRSPATRGRSISPERVFHSPRRRSIPPRRRHSPSISLSPRRRSSYSRR
RSRSRSRHRSPSPEWRRIRSPCRDISPSSVRHRLSSPVRWRRRSPSPVRRRSPSNLRRRS
PLHVRRRSPLSLRPRSPSPVRHGSPSPIRRRSPRPARRRSPIPTRRRSPSPVRRRSTSRL
RHWRSPSSPLRRSPSLVRNKSPIRFGRKSPGPSRRRSPSAYESSSPSPIQNGSRSPIRRS
PVYNKRSTKESFREKIRTMMRSPEKDPKDDSNLGKKAFTSSSFPGGDRRSTPCESTRRKI
IEHMVHDDSSSPHRRREQKPRHESPTTSNEEENNSRGHVDLKSEYKHQNLSSHASDVCKQ
IDSPVKVHDNEENSPKSFAGHRVSDKMESRKKEQEKRSEKSSGKVVYSESSDHQRPPALY
KDLPPEDKHRVSIPEDDQCYKSQTLLFEKAEKNNRNGSYESGSDHSGKHIIEKKDKRKHK
RSEKRQMASDDDYSSDSDIEYRKESKRRRKEEKKLRKEEKRQQREARRRRREQRRAEKLK
AKNQNDDDSSEGEYVRRTASRRSDDEGAESEQKKLEIELRNGALESLKAKKGIDH
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggtacgtcttccgagcaagacactcgattctcaaataag
caagcgaagctgttgaaatcgcagaagtttgccccagaattggagcatctggttgacatg
accaaggtcaagatggatgtcatccgtccctggattgccaatagggtaactgaacttctt
gggttcgaagatgaagttcttatcaactttatatatggtctccttgatggaaaggaagtg
aatggaaaagaggttcaaatcccgctcactggattcatggagaaaaatacagtgaagttt
atgaaggagctttggacgcttcttctcagtgcccagggaaatgcaagtggcattccccaa
cagttcttggatgccaaagaggaagaagcccgaaagaaaaaggctgaggctgatcggata
gcaaatgaaattcagaagaagaaagagaatgaaagcagagaactcgggcaagagaggtta
aggaagatggacaatggggttgaaatgaaggccaacattgcagatttggagcacacctca
aggcatttgccacggaggagttccagcattcgttctggggatgataaagaaaccaacagg
agaaatggttttagtggaagaagcagagattctaggtctccccattcagttgataattcc
tttgcttcccattgggcttcacaatctcgatcgactagcaagtccctttcatgttccaga
agtgattcgagtgataggcataagtcaaggagcagttctagatctcctgcaactcggggg
cgctccatatctccagaaagggtgtttcattcacctagaagacgttcaattccacctcgt
aggaggcactcaccctcgatttccctttctcctcgaaggagatcatcttattctaggcga
agatctagatcaagatcacgtcataggtcaccttccccagaatggcgtagaatacgttct
ccttgtagagacatatcaccttcctcggtgcggcaccggttatcttcacccgttcgatgg
cgtagaaggtctccatcacctgtcaggcgtagatctccttcaaatttgcggcgtagatct
cctttgcatgtccgacgcaggtctcctttgtccctacgtcctcgatctccttcccccgtg
cggcatggaagtccttcacccattagacgtagatcacctcgtcctgcacggcgtaggtca
cccattccaacacgccgtagatcgccctctcctgtacggcgaagatctacctctagactg
agacattggaggtctccatcgagtccacttcgcagatctccatctcttgtgagaaacaaa
tctcctattcgttttggcaggaaatcacctggtccttcccgtcgcaggtctccttcagca
tatgaatcaagctccccatctcctatccagaatggatcccgttcacctataaggagatct
ccagtgtacaacaagaggtcaacaaaggagtcttttagagaaaagattaggactatgatg
aggtcaccagagaaagatccaaaggacgatagcaatttgggtaaaaaagcgtttacttcg
tcatcttttccaggtggagatagaaggtccactccatgtgaaagtactagaaggaagata
attgagcatatggttcatgatgacagctcaagtccacatagacgaagagagcaaaaaccc
cgtcatgaaagtcccaccacaagcaacgaggaagaaaataattctaggggtcatgttgat
cttaaatctgagtataaacatcagaatctatcttcacatgcatctgatgtctgtaagcag
atagattctcctgtcaaggtacatgacaatgaagagaactctcccaaaagtttcgctggt
catcgtgtttctgataaaatggaatcaagaaaaaaagagcaagagaaaagaagtgagaag
tcttctgggaaggtggtttattctgagagttctgaccaccaaagaccaccagcactgtac
aaggaccttccgccagaggacaaacatcgggtatcaattccggaagacgaccagtgctat
aaatctcaaactttgctgtttgaaaaggctgaaaagaataatcgaaatggtagttatgaa
tctggttcagatcatagtggtaagcacataattgagaaaaaggacaagaggaagcataaa
agatctgagaagcgacaaatggcttctgacgatgattatagctctgattctgatattgag
tataggaaggaatcgaagaggaggaggaaggaagaaaagaagctacggaaggaggagaaa
cgtcaacagcgtgaggcgcggcgccgtagaagggaacaacgtcgtgcagagaagcttaaa
gcaaagaatcagaatgatgatgattcttctgaaggtgaatatgttcgaaggacagcttct
cgtcgaagtgatgatgagggggcagagtcagagcaaaagaaacttgagatagagttgcga
aacggggctcttgaatctcttaaggcaaagaaggggatcgatcactaa
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