Tripterygium wilfordii (thunder duke vine): 119992041
Help
Entry
119992041 CDS
T07256
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04142
Lysosome biogenesis
twl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119992041
04148 Efferocytosis
119992041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119992041
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119992041
Hops complex
119992041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS18_solenoid_2nd
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
zf-C3HC4_2
OCRL_clath_bd
zf-RING_5
DUF8145
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
119992041
NCBI-ProteinID:
XP_038694569
LinkDB
All DBs
Position
22:1244334..1249515
Genome browser
AA seq
953 aa
AA seq
DB search
MYQWRKFEFFEEKYGGKCAIPEEVSGRIECCSSGRGKVVIGCDDGSVSLLDRGLKFNFGF
QAHSSSVLFLQQLKQRNFIVTVGEDEQIAPQQSVLCLKVFDLDKMQPEGSSNTSPDCIGI
LRIFTSQFAEAKITSFSVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDVEN
SSDKSLSSITGLGFRVDGGALQLFAVTPGSVTLFSMQFQPPQKHTLDHIGCDFNGVTMSD
RLELIIGRHEAVYFYEVDGRGPCWAFEGEKKLIGWFRGYLLCVIADQRNGKNTFNIYDLK
NRLIAHSLVVKEVSHMLCEWGNIVLIMADKSALYIGEKDMESKLDMLFKKNLYTVAINLV
QSQQADAAATADVLRKYGDHLYSKQDYDEAMAQYINTIGHLEPSYVIQKFLDAQRIYNLT
NYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNMFIKSEDGVGEHKFDVETAIRVCRAA
NYHEHAMYVAKKAGRHEWYLKILLEDLGSYEEALQYILSLEPSQAGVTVKEYGKILIGHK
PTETIQILMRLCTEDGELARRGTSNGSYLSMLPSPVDFLNIFMHHPESLMDFLEKYIDKV
KDSPAQVEIHNTLLELYLSNDLNFPLSISQADNGVDLSLRTKSGAAAMFRVESNGKSITN
HNDLYEEKGRLGRQEKGLLLLKSAWPSDLEHPLYDVDLAIILCEMNVFKQGLLFIYEKMK
LYKEVIACYMQAHDHEGLIACCKRLGDSGKGGDPSLWADLLKYFGELGEDCSKEVKEVLT
YIERDDILPPVIVLQSLSKNSNLTLSVIKDYIARKLEQESKLIDEDRRAIEKYQEDTLAM
RKEIQDLRINARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRA
VLEMKRGLEQNSKDQDRFFQQVKSSRDGFSVIADYFGKGLISKTTTNGSTGAV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaaattcgagtttttcgaggagaaatacgggggaaagtgcgcgatt
cctgaggaggttagtgggaggatcgagtgctgctctagcgggagaggcaaggtggtgatc
ggatgcgatgatggcagtgtgagcttgcttgatcgaggcctcaagttcaatttcggattc
caagctcactcctcttctgttctcttcctccagcagctcaagcaacgcaacttcatagta
acagtgggagaagatgagcagattgctccacagcaatccgtactgtgcctaaaggttttt
gacctagataaaatgcagcccgaaggctcaagcaacacaagtcctgattgtattgggatt
ttgcgaatatttaccagtcagtttgctgaagcaaagattacatcattttcagtattggag
gaagctccaccaatacttctaatagccattggattagataatggttgcatttactgcatc
aaaggggacattgcgcgagaacgtattacccgtttcaagcttcaggtggacgtagagaat
tcttcagacaagagtctatcttctattaccggtctagggtttagagtagatggtggagcc
cttcaactatttgctgtaactccaggttcagtgaccttgttcagcatgcagtttcagcca
cctcagaagcacaccctagatcatattggatgtgattttaacggtgttacgatgagtgat
cgcttggaactgataattggtcgacatgaagccgtgtacttttatgaagttgatggacgt
ggtccttgttgggcatttgaaggagagaagaaactaattgggtggttccgtggatacctg
ttgtgcgttattgcagatcaaagaaatggcaagaatactttcaatatttatgatttgaaa
aaccgcttaatagcccacagtcttgtggttaaggaggtgtctcacatgctttgtgagtgg
ggtaatatagttctcataatggctgacaagtctgctttatatattggagagaaggatatg
gagagcaagttagatatgctattcaagaaaaatctttatactgtagctatcaatcttgtc
caaagtcaacaagctgatgctgccgcaacagctgatgttctaaggaaatatggggaccat
ctgtatagcaaacaagactatgatgaagctatggcccagtacatcaacactatcggtcac
cttgaaccttcatatgtcatacagaagtttctggatgcacaaagaatctacaaccttact
aattacttagagaagttacatgaaaaagggctcgcttctaaagatcatacaactcttttg
ttaaattgctacaccaaattaaaagatgttgaaaagctgaatatgttcatcaaaagtgag
gatggtgttggggaacataaatttgatgtggagactgcaataagggtctgtcgcgctgcc
aattaccatgagcatgcaatgtatgttgccaagaaggctggaaggcatgagtggtacttg
aagatattgctcgaagaccttggcagttatgaagaagctctgcaatatattttgtctctt
gaacctagtcaagcaggagtaactgtaaaagagtatggtaagattctcatagggcacaaa
cccacggagacaattcagatactcatgaggctttgtacagaggatggagaattagcgagg
agaggaacttcaaatggctcatacctatctatgctgccatcacctgttgattttctcaac
attttcatgcaccacccagagtccctcatggattttcttgaaaaatatattgataaggtg
aaagactccccagctcaagtagaaattcacaatacactgttggagttgtatctatccaac
gatttgaacttcccattgtcaatatcccaagctgacaatggagtcgatctttctcttaga
accaaatcaggagcggctgcaatgtttagagtggagtccaatgggaaatcaattactaac
cacaatgatttatacgaggagaaaggtcgtctggggaggcaagaaaagggcctacttttg
cttaagagtgcatggccttctgaccttgagcacccactttatgatgttgatcttgctata
attctatgtgagatgaatgtatttaaacaagggctgctgtttatctatgagaagatgaag
ctttataaagaggtaattgcctgctacatgcaagcccatgatcatgaaggattgattgca
tgctgcaaaaggttgggggattctggtaaaggaggggacccttctctttgggcagatctg
ctgaagtattttggtgaacttggagaagattgctctaaagaagtgaaggaagttttgact
tatatcgagagggatgacatcttgcctcccgttatcgttcttcaatccctgtccaaaaat
tcgaacctcacgctctctgtcattaaggattatattgctcggaaacttgaacaggagtca
aaattgattgacgaggatcggcgggctattgagaagtatcaggaagacacattggcaatg
aggaaagaaattcaggatcttaggatcaatgctcgaatctttcaacttagcaagtgcact
gcctgcaccttcacccttgatcttcctgccgtccacttcatgtgcatgcattcattccat
caacgctgtcttggagataatgaaaaagaatgccctgaatgtgctcctgaatatagagca
gttcttgaaatgaagagaggcttggaacagaattccaaagatcaagacaggtttttccag
caagtgaaaagttcaagggatgggttttctgtgattgctgattattttgggaaggggctc
atcagcaaaactactaccaatggatcgacgggtgctgtttga
DBGET
integrated database retrieval system
