Tripterygium wilfordii (thunder duke vine): 119992201
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Entry
119992201 CDS
T07256
Name
(RefSeq) THO complex subunit 4D-like
KO
K12881
THO complex subunit 4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119992201
09122 Translation
03013 Nucleocytoplasmic transport
119992201
03015 mRNA surveillance pathway
119992201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119992201
03041 Spliceosome [BR:
twl03041
]
119992201
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119992201
TREX complex
119992201
Spliceosome [BR:
twl03041
]
Complex C
Other components
EJC/TREX
119992201
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119992201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
119992201
NCBI-ProteinID:
XP_038694799
LinkDB
All DBs
Position
3:2522213..2528907
Genome browser
AA seq
303 aa
AA seq
DB search
MATSVDMSLDDLIKSNRERVRGRNRGGGGRGRGHGPSGYLRGERMTGPVRRGPLAVNARP
SSYMIAKPARRTRRFPWQHDLFEDSLRAAGIAGVEVGTKLNVSNLDSGVSNEDIRELFAE
IGDLERYAIHYDKNGRPGGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKLEVVGANVEIP
VSARVNVTGENGRRKRTVVMTPGAGLNGGGSSINRGSGQNRRWAMRNGRGRGAMGNGRGH
GAMGNGRGHGAMGNGRGRGRGAARGWGHGWVRGHGRGRKQPFDQSADDLNDDLEKYHAEA
MQT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccacatctgttgatatgtctcttgatgatcttataaaaagtaatagggagagagta
agaggacggaataggggtggtggtggccgtggccgtggccacggaccaagtggctactta
cgtggtgaaagaatgactgggcctgttcgaagaggtcctcttgcagtgaatgctcgtcca
tcatcctacatgattgccaagcctgctcgcagaaccaggagatttccgtggcagcatgat
ttgtttgaagatagcctaagagctgcagggatagctggagttgaagttggcacaaagcta
aatgtttccaatttggactctggtgtatccaatgaagatataagggaactttttgctgag
attggggatctggaacgttatgctattcattatgacaaaaatggtcgccctggtggctct
gctgaggtggtatatactagacgaagtgatgcctttgcagctcttaagcgatacaacaat
gttttgcttgatggaaagcctatgaagcttgaagttgtaggcgccaatgtggaaattcct
gtttcagctcgtgtgaatgtaaccggagaaaatggaaggaggaagagaacggttgttatg
acgcctggagcaggtctaaacgggggtggctcttccataaaccgtggttctggccaaaac
cgtcgttgggcaatgaggaatggccgtggccgtggggctatggggaatggccgtggccat
ggggcaatggggaatggccgtggccatggggcaatggggaatggccgtggccgtggccgt
ggtgcagcacggggttggggccatggctgggtaaggggccatggccgtgggaggaagcaa
ccttttgaccagtctgctgatgatcttaacgacgacttagagaagtatcatgctgaagcc
atgcagacttag
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