Tripterygium wilfordii (thunder duke vine): 119992227
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Entry
119992227 CDS
T07256
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119992227
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119992227
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119992227
NCBI-ProteinID:
XP_038694837
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Position
22:3072361..3074345
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AA seq
435 aa
AA seq
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MAAVNKSFLVLFVLSIAVVVHANIDKFDEYWASRADEAQKVAEDAYNPNPAGLVNDFNFH
VDKTMTGTNSTRRNLKKYTGKCLATNPIDRCWRCDPNWANNRKRLADCALGFGRKTIGGK
MGRIYVVTDASDSDMVHPKPGTLRHAVIQKEPLWIIFARSMIIRLNQELIMTSDKTIDAR
GANVHIAHGAGLTLQFIKNVIIHGLHIHDIVSGNGGLIADSVDHYGIRTQSDGDAISIFG
SSHIWIDHISMSNGKDGLVDIIQGSTAITISNCHMTDHNEVMLFGASDSYSKDQIMQVTV
AFNHFGQGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPNVNAK
QVTKREYSPESVWKSWSWRSEGDLMMNGAYFVQSGHPKSSRRFSKVDMIKAKPGTFVTRL
TRFAGSLNCVVGKPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtaaacaaaagcttccttgtgttgtttgtgttgtccattgctgtagttgtc
catgctaacattgacaaattcgatgagtactgggcgtcgagagctgatgaagcacagaag
gtggcagaagacgcttacaacccgaatcccgctggccttgtaaatgatttcaacttccat
gtcgacaagaccatgacaggtaccaacagcactagaaggaacttgaagaaatacacaggc
aagtgcctggccacaaaccccatcgacagatgctggcgttgcgacccaaactgggctaat
aaccggaaaagactagctgactgcgcccttggatttggccgcaaaaccattggtgggaaa
atgggaaggatttatgttgtcactgatgcctcggacagcgacatggttcatcctaaacct
ggaaccttacgccacgccgtgatccagaaggaaccactttggatcatttttgctcgtagt
atgatcattagactcaaccaggagcttataatgacaagtgataagaccatcgatgctagg
ggtgccaatgtgcatattgctcatggtgctggtctgactcttcagtttatcaagaatgtg
atcatccatggcctacacattcatgacatcgtctcaggcaatggtggccttattgctgat
tcggtggaccactatggtatcaggactcagagcgatggcgacgccatttccatcttcggt
tcctcccacatttggatcgatcatatttcgatgtctaatggcaaagatggtcttgttgat
atcatccaaggatcaactgccattaccatctcgaattgtcatatgactgaccacaacgag
gtgatgttgtttggtgcaagcgacagctacagcaaagatcaaatcatgcaagtgactgtt
gccttcaaccattttggccaaggattggtgcagaggatgccaaggtgccgatggggtttc
gtccatgtagttaacaatgactacactcactggctcatgtatgccattggtggtagccag
caccctaccattatcagtcagggcaacagattcattgctcctccaaatgttaacgctaaa
caggtgaccaagagagaatattcaccggagagcgtatggaagtcatggtcatggagatca
gagggagatttgatgatgaatggtgcatactttgtacaatctggacacccaaaatcaagc
agacgattctcgaaggtggatatgatcaaagccaagcctggtacttttgtaaccagactt
acacggttcgcgggatctctcaactgtgtagtaggcaagccttgttag
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