Tripterygium wilfordii (thunder duke vine): 119992426
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Entry
119992426 CDS
T07256
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119992426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
119992426
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119992426
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119992426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
119992426
NCBI-ProteinID:
XP_038695032
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Position
23:259524..262238
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AA seq
381 aa
AA seq
DB search
MKRTRPTPSLSASTLPEPPPTPQPTFNAFNRRKPTNPKSLLKLTPPPTIITQSHIWSPLD
LTQSELSLPLTFPTGQTFRWKQTAPLQYTGAVGPHLVSLKQVQNGDVLYCVHRTLCESSA
KSALLDFLNIDISLTEIWRAFSAADARFAELACYLRGARVLRQDPLECLIQFLCSSNNNI
ARITKMVDYVCSLGTYLGGVEGLEFFEFPSLERLSVVTEQELREAGFGYRAKYITGTVNA
LQSKPGGGVKWLESLRKSDLPVVIDALSTLPGVGPKVAACVALFSLDQHHAIPVDTHVWQ
IATRYLVPELAGSRLTPKLCSRVAEAFVSRYGSYAGWAQTLLFIAELPSQKAIIPSHCQT
TTKENKSSKRKESQIYAGKLE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaagacccacgccgtcgctatccgcctccactcttcctgagccaccacct
actcctcagcccaccttcaatgcgttcaaccgccgcaagcccacaaaccccaaatctctc
ctcaaattaacaccaccaccaacaataataactcaatcccatatctggtctccactcgat
ctcacgcaatcggagctctctctgcctctcactttccccaccggtcaaaccttccgttgg
aagcagacggctcctctccaatacaccggcgctgtagggcctcacctggtctcgctgaag
caagtccagaacggcgacgttttgtattgtgtacaccgaaccctttgcgaatcttctgca
aagtcggctctactagatttcctcaacattgatatttccttaactgaaatttggagggca
ttctccgcggcagacgctcggttcgctgaactggcgtgctatttgcgaggagcaagggtg
ttgagacaggatccgctagaatgcttgatccagttcctgtgctcgtctaataacaacatt
gcaaggattactaaaatggtggattatgtttgttctctagggacgtatttggggggtgtt
gagggtttggagtttttcgagtttccatcactggagcgattatcagtggtgaccgagcag
gagcttagggaagctggttttggctacagggccaaatacattactggcactgtgaatgct
ttgcaatcaaaacctggcggaggtgtgaaatggctcgagtctcttcgtaaatcagatctc
ccagtggtgattgatgctctgtctacattacctggagtcggtcccaaggtggcagcatgc
gtagctctcttttcccttgatcaacaccatgccattcctgttgatacacatgtgtggcag
attgccacaagataccttgtgcctgagctagcaggttcccgattgacaccaaagctgtgc
agccgtgttgctgaggcattcgtgagcagatacgggagttatgctgggtgggctcaaact
ctacttttcattgctgaactaccttcccaaaaagctatcataccatctcattgtcaaact
accaccaaagagaataaatctagtaagagaaaggaaagccaaatttatgctggtaaactg
gagtaa
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