Tripterygium wilfordii (thunder duke vine): 119992437
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Entry
119992437 CDS
T07256
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119992437
04121 Ubiquitin system [BR:
twl04121
]
119992437
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119992437
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119992437
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119992437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
CxC4
Rad50_zn_hook
Prok-RING_1
HypA
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119992437
NCBI-ProteinID:
XP_038695047
LinkDB
All DBs
Position
3:complement(9852456..9856046)
Genome browser
AA seq
307 aa
AA seq
DB search
MSSSRNTHWCHRCRRPVRLRGRDALCPYCSGGFVQELDDMVRISPLDFFGLDNDEDHDQR
FGLMEAFSGFMRQRLADRSYNHDIRGRSDPVPEGFGPLLVFGGQIPFRLSGNGGFEAFFN
GTPGIGITRGNAGDYFIGPGLEELFEQLSANDRRGPAPASRSSIDAMPTIKITQRHLRSD
SHCPVCHEKFELGSEVRQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQGSGSSHGSQS
SSGRSRSSTNNERENSRDNQGRRNPFSYLWPFRSSSSSSRHNGTAGNSSPTMHDSNHQMG
YSGWPFD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtagcaggaacacccactggtgtcacagatgcaggcggccagtcagactgcgt
ggacgagatgcactttgtccctactgcagtggaggatttgttcaagaacttgatgatatg
gtgcgtatcagccctttagatttctttggactggacaatgatgaagatcatgaccagagg
tttgggcttatggaagctttctcaggttttatgagacagcgattagcagacagaagttat
aatcatgatatcagggggagatcagatcctgttcctgagggatttggtcctttgttggtt
tttggaggccaaataccttttaggctgtccggaaatggtggatttgaagctttttttaat
gggactcctggaattggaatcacacgaggtaatgctggagattattttataggtcctgga
ttggaggaattgtttgaacagctctcggctaatgatcgccgaggtcctgccccagcatcc
agatcttcaatcgatgcaatgccaaccatcaagatcacacagaggcatcttcgttctgat
tctcattgtcccgtctgccatgaaaaatttgagttgggatctgaagtgagacagatgccc
tgtaaccatatgtatcactcagactgtatagtcccatggctagtccagcacaactcatgc
cctgtatgtcgccaagagctgccaccacaaggatctggtagcagccatggttctcaaagc
tcaagtggtcgaagtagaagcagcacaaacaatgaaagggaaaatagtagggacaatcaa
ggaagacgaaatccattctcttacctttggccattccgctcatcaagttctagctctagg
cataatggaacagccggaaacagctcaccaactatgcatgacagtaaccaccaaatgggt
tattctggatggccttttgattag
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