Tripterygium wilfordii (thunder duke vine): 119992977
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Entry
119992977 CDS
T07256
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119992977
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
119992977
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119992977
03036 Chromosome and associated proteins [BR:
twl03036
]
119992977
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
119992977
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
119992977
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
119992977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
ComGF
Motif
Other DBs
NCBI-GeneID:
119992977
NCBI-ProteinID:
XP_038695758
LinkDB
All DBs
Position
23:11421094..11429134
Genome browser
AA seq
551 aa
AA seq
DB search
MIVKRLHLLRRLCRIRDVIVVKLTIRNRSVCYFHCEFGQTRFVENERWRRSCGEYGWRAG
ASGVEILSGFWRTKCRGGSAGRTGDHLATGDRGGRVVLFERTDIRDHGGSRRDLEMMDYS
ISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTASGALFLLSSNDKTIKFWKV
QEKKVKKVCDMNVDPVKAVGNVPIVGSSTSTSLKPCIANGKYTEKSVGHSSCDFEFPSGG
IPSLRSPTVVVVTSHEMSLVARCRRIYSHAHDYHINSISNNSDGETFISADDLRINLWNL
DISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSISLIDMRQSALCDSH
SKLFEQLEMPGTRSFFTEIIASVSDLKFAKDGRHILSRDYMTLKLWDINMDSGPVATFQV
HEYLRPKLCDVYENDSIFDKFECCLSGDGHRVATGSYSNLFRVFGCSEGSTEATTLEASK
NPMRRQVQTPSRPARSLGNLSCGFRRGVDNSGGDSNGNAYDFSTKLLHLAWHPTENALAC
AASNSLYMYYS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgaagagattgcatttactaaggagattgtgccgaatccgtgatgttatcgtt
gtgaaactgactatcagaaatcgatcggtgtgttactttcattgtgaattcggtcaaaca
agatttgtcgagaatgaacggtggcgaaggagctgtggcgagtacggctggagggctgga
gcctctggagtggaaattctctcaggtttttggcgaacgaagtgccggggaggaagtgca
ggaagaactggggatcaccttgcaactggagatcgcggaggtcgggttgttttatttgaa
agaacagatataagagatcatggtggaagtcgaagagatctcgagatgatggactactcg
attagtaggcatccagagttccgctataaaacagagtttcaaagccatgagcctgaattt
gattatcttaagagcttggaaattgaggagaaaatcaataaaattagatggtgtcagaca
gccagtggcgccctatttcttctttcatctaacgacaaaaccatcaaattttggaaggtt
caagagaagaaggttaagaaagtatgtgacatgaatgtggaccctgtgaaagctgtggga
aatgttcctattgttgggtcaagcacatccaccagcttgaaaccttgtattgcgaatgga
aagtacacggagaaatccgttggtcattcaagctgtgattttgagtttccatctgggggt
atcccttctttgcgttcgccaacggtagttgtagtgactagtcatgagatgagccttgtg
gcgaggtgtcgaagaatatattcccatgcccatgactaccacattaattccatttctaat
aacagtgacggggagacttttatatcagctgacgatttacgaataaatctttggaacttg
gatattagcagtcagagttttaatattgttgacgtgaagcctgcaaacatggaggatctg
actgaggtgataacttcagcagaatttcaccctactcactgtaacatgttagcatatagt
agttcgaagggctcaatcagtctgattgatatgcgacagtcggctctgtgtgacagtcat
agcaaattgtttgagcagctggagatgcctggcacaaggtcctttttcacagaaataatt
gcgtcagtttcggatttaaagtttgctaaggatggaaggcatatacttagtcgtgactac
atgactctcaagttgtgggacataaatatggattctggcccggttgcaactttccaggtt
catgaatacttgagacctaagctctgtgacgtgtatgaaaatgattctatctttgacaag
tttgagtgttgtcttagtggagatggacatcgagtggcaactggttcctacagcaatctg
ttccgcgtgtttggttgttctgaaggaagcacagaagcaacgacattggaagccagtaaa
aatcccatgaggaggcaagtccaaacaccatcaaggcctgctagatctctgggcaatcta
tcttgtggtttcagacgaggtgtggataactctggaggtgattcaaacggaaatgcctat
gatttctcaacgaagcttctacatctagcatggcatccaactgaaaatgcactcgcatgt
gctgcctcaaacagcctttacatgtactattcttaa
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