Tripterygium wilfordii (thunder duke vine): 119992978
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Entry
119992978 CDS
T07256
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119992978
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
119992978
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119992978
03036 Chromosome and associated proteins [BR:
twl03036
]
119992978
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
119992978
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
119992978
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
119992978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
119992978
NCBI-ProteinID:
XP_038695764
LinkDB
All DBs
Position
23:11413005..11420502
Genome browser
AA seq
515 aa
AA seq
DB search
MNGVEEAVAGSAEAPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDRTGDHLATGDRGG
RVVLFERADTKDHGGNRRDLEMMDYSNSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQSANGALFLLSTNDKTIKFWKVQEKKVKKICDMNVDPVKAAGNGPIAGSSRSTLSK
PCIANGECTENPVGHSSADFEFPSGGIPSLRLPTVVTSHEMSLVARCRRIYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNT
LAYSSSKGSIRLIDMRQSALCDSHSKLFEQPEVSGTRSFFTEIIASISDIKFSKDGRHIL
SRDYMTLKLWDINMDSGPVTTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCSKGSSEATTLEASKNPTRRQVQTPSRPARSLGSLSRGFRRGADNSGVDSN
GNAYDFSTKLLHLAWHPTENSLACAASNSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgtagaagaagctgtggctggttccgctgaagcacctcagccgctggagtgg
aaattctctcaggtttttggcgaacggactgcaggggaggaggtgcaggaagttgatatt
atttctgccatcgaatttgatagaaccggggatcaccttgccactggagatcgcggaggt
cgggtggttttatttgaaagagctgatacaaaagatcatggtggaaatcggagagatcta
gagatgatggattactcaaacagtaggcatcctgagttccgctataagacagagtttcaa
agccatgagcctgagtttgattatctcaagagcttggaaattgaggagaaaataaataaa
attagatggtgtcagtcagccaatggcgccctatttcttctttcaactaatgacaaaacc
atcaaattttggaaggttcaagagaagaaggttaagaaaatatgcgacatgaacgtggac
cctgtgaaagctgcaggaaatggtcctattgctggttcgagtaggtcaaccctctcgaag
ccatgtattgcaaatggagaatgcacagagaaccccgttggtcattcaagtgctgatttt
gagtttccatctgggggtatcccatctttgcgtttgcctacggtagtaactagtcatgag
atgagccttgtggcgagatgtcgaagaatatatgcccatgcccatgactatcacatcaat
tccatttctaataacagtgatggagagacttttatatcggctgatgatttgcgaataaat
ctttggaacttggaaattagcaatcagagttttaatattgttgatgtgaagcctgcaaac
atggaggatctgactgaggtgataacttcggcagaatttcaccctacccattgcaacacg
ttagcatatagtagttcgaaaggctcaattcgactgattgatatgcgacaatcggctcta
tgtgatagtcatagcaaattgttcgagcagccggaggtgtctggcacaaggtcctttttc
accgaaataattgcctcaatctcggatataaagttttcgaaagatggaaggcatatactt
agtcgtgactacatgactctcaagttgtgggacataaatatggattctggccctgttaca
actttccaggttcatgaatacttgagacctaagctctgtgatttgtatgaaaatgattct
atctttgacaagtttgagtgttgtcttagtggagatggacttcgagttgcaactggctcc
tacagcaatctgttccgtgtgtttggttgttccaaaggaagctcagaagctacaacattg
gaagccagcaaaaatcccacgaggagacaagtccaaacaccatcgaggcctgctagatct
ctgggcagtctatctcgtggtttcaggcgaggtgcggacaactctggagtcgattcaaat
ggaaatgcttatgatttctcaacaaagttgctacatctggcatggcatccaactgaaaac
tcacttgcgtgtgctgcctcaaacagcctttacatgtattacgcatga
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