Tripterygium wilfordii (thunder duke vine): 119993017
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Entry
119993017 CDS
T07256
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119993017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119993017
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119993017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
C1_2
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
119993017
NCBI-ProteinID:
XP_038695827
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Position
23:12405833..12413106
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AA seq
753 aa
AA seq
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MPRKVSYGVDYDDDEYGDFDDYDDDDFEVEQTGQHGSKQEKRTSGLWRCSICTYDNEESL
YACDICGVLRNPLLNIDSNGDKGSVNDIGKDSGVSVMAKSLFASMPHQAPKKPVVYQQQN
DDFVTEEGNKLHKCGNVGGNFHEFHKAFSSGSHSRITIAPFMFDVPSIDDLVSDGLNRSK
TGSKASFLNSKSSAVSSGVAEKNGAVALQSNIKKSDKSSVVNRKDNVVGESSSTYGVVNK
QSSEKSLDGSSLLVPKSKRDVLNDSNYSISGGEPHDLINNLSNVSLNNKSGKSNKVDPGK
ANSRVHYQPEKWMLLSKAQDDLTQLNLAIVGHVDSGKSTLSGRLLHLLGRITQKQMHKYE
KDSQLQGKGSFAYAWALDESTEERERGITMTVAVAYFDTKTYHVVVLDSPGHKDFVPNMI
SGATQADAAILVIDASFGAFEAGMDGTKGQTREHAQLIRSFGIDQVIVAVNKMDAVDYSK
ERFDLIKLQLGAFLHSCNFKESSLTWMPLSAMENQNLVAAPSEVRLLSWYRGPCLLDAID
FLQPPSRDLSKPLLMPICDVIKLPTMGQVSACGKLEAGALRSGSKVLVMPSGIVGTVRSL
ERDSQVCGVARAGDNVAVSLQGIDGGHVMAGGVLCHPDFPVAVARHLELKILVLDVVTPI
LIGTQLEFHIHHAKDAARVTRILSLLDPKTGKARKKGPRCLLAKQNAIIEVILNEPVCVQ
EFSNCRALGRVSLRALGRTVALGIVTRIVEEQE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtgagctatggcgtcgattatgatgatgatgagtatggtgatttcgat
gactatgacgatgatgactttgaagtagaacaaactgggcaacatggatctaagcaggaa
aagagaacttctgggctatggcgttgctcaatttgcacctatgataatgaggagagcttg
tatgcatgtgatatctgtggggttcttcgtaatcctttgttaaacattgacagcaacggt
gataaaggatcagttaatgacataggcaaagattctggagtgtccgtaatggccaagtct
ctttttgcatcaatgcctcatcaagcacccaaaaagccagtggtgtatcaacagcagaat
gatgattttgtgacagaagaagggaataaacttcacaagtgtgggaatgtcggaggaaat
tttcatgaattccataaggcttttagttctggtagccattctcgcataactatagctccc
ttcatgtttgacgttccatcaatagatgatttggtttctgatggattgaatcgctccaaa
acaggttcaaaagccagctttcttaactcgaaatcatcggcggtttcctcaggtgtcgct
gagaagaatggtgcagtagcactgcaatcaaatatcaaaaagtcagataagtcttctgtg
gtgaacaggaaagataatgttgtgggtgagagcagttctacttatggtgtagttaataaa
cagtcaagtgaaaaatcattagacgggtcatctttattggttcccaagagcaagcgtgat
gttctgaatgacagcaattattcaatcagtgggggtgagccacatgatcttatcaataat
ctgagcaatgtatctttgaataataaatctggaaagtcaaataaagttgatcctggaaaa
gccaactcacgtgtgcattatcaacctgaaaaatggatgctcctgagcaaagcacaagac
gatttaactcaactgaatcttgcaattgttggccatgttgattctggaaaatcaacactt
tcaggtaggctgctacatcttctgggaagaataactcaaaaacaaatgcacaagtatgaa
aaagattcccaattgcagggtaaagggtcctttgcttatgcttgggcattggatgagagc
actgaagaaagagagaggggaataactatgacggtggccgttgcttactttgatacaaaa
acatatcatgttgttgtgcttgattctcctggccacaaggattttgttccaaacatgata
tctggggcaacacaagctgatgctgccattctcgtgatcgatgcctcatttggcgcattt
gaagctggtatggatggtaccaaggggcaaacaagggagcatgcacaactcattagaagt
tttggtattgatcaagttatagttgcagtcaacaaaatggatgctgtggattacagcaag
gaacggtttgatttaattaaactgcaattgggagcatttcttcattcttgtaatttcaag
gaatcttctctgacgtggatgccattgagtgcgatggaaaatcaaaatctagtagcagct
ccttccgaagttcgtctattatcctggtatcgaggaccttgtttgttggatgcaattgat
tttcttcaacctccttcacgggatctttcgaaacctttgcttatgcccatatgtgatgtt
atcaagctacctacaatgggccaagtgtctgcatgtggtaaattggaggctggagccctt
cgaagtggatcaaaggttttagttatgccatctggaattgtaggaactgtgcgttcacta
gagcgtgactctcaggtttgtggcgttgcaagagctggagataatgtagctgtcagtctg
cagggcattgatggaggtcatgtgatggctggaggagttttatgtcaccctgattttcca
gttgcggttgcaagacatttggagttgaagattcttgttttagatgttgtcacaccgatt
ttgattgggacccaattggaatttcacatacatcatgcaaaggacgctgcaagggtgacg
aggatattgtcgttacttgatccaaagactggcaaagcaaggaagaagggcccccgctgt
cttttggctaagcagaatgccataattgaggtcattttgaatgaaccagtttgtgtgcaa
gagttctcaaattgcagagctcttggaagagtttctttacgagcattaggtagaacggtt
gccttaggaattgtaacccgaatagttgaagagcaggaatag
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