Tripterygium wilfordii (thunder duke vine): 119993120
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Entry
119993120 CDS
T07256
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03030
DNA replication
twl03410
Base excision repair
twl03420
Nucleotide excision repair
twl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119993120
03410 Base excision repair
119993120
03420 Nucleotide excision repair
119993120
03430 Mismatch repair
119993120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twl03032
]
119993120
03036 Chromosome and associated proteins [BR:
twl03036
]
119993120
03400 DNA repair and recombination proteins [BR:
twl03400
]
119993120
DNA replication proteins [BR:
twl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119993120
DNA Replication Termination Factors
ELG1-RFC complex
119993120
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119993120
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119993120
Check point factors
HRAD17(Rad24)-RFC complex
119993120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_16
AAA_11
AAA_assoc_2
AAA_22
ATPase_2
AAA_5
DNAX_ATPase_lid
AAA_14
RuvB_N
AAA_7
AAA_30
AAA_24
DUF815
bpMoxR
AAA_19
ResIII
nSTAND3
AAA_28
ABC_tran
AAA_3
TniB
AAA_2
TIP49
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
119993120
NCBI-ProteinID:
XP_038695989
LinkDB
All DBs
Position
23:298908..304386
Genome browser
AA seq
365 aa
AA seq
DB search
MTEVISLMDIDGEDDDSLKPIDKGENVVVPGTPPPPVPKATLWVEKYRPQSLADVAAHRD
IIDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGPQYHNMILEMNASDDRGIDV
VRQQIQDFASTQSFSFGVKSSVKLVLLDESDAMTKDAQFALRRVIEKYTKNTRFALICNH
VNKIIPALQSRCTRFRFAPLDPIHVTERLKHVITEERLDVSESGLAAVVRLSNGDMRKAL
NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFSESFKRTSEIKARKGLAL
VDIVREVTMFVFKIKMPSNVRVQLINDLADIEYRLSLGCNDKLQLGSLIASFTQARSALV
AAAKS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggttatatcgctaatggatatcgacggggaggatgatgattctcttaagcca
attgacaaaggcgaaaacgtcgtcgtaccaggcaccccaccaccaccagtccccaaagct
actctgtgggtcgagaagtaccgtcctcagtcactcgccgatgttgccgcccatcgcgat
ataatcgacactattgataagctgactagcgagaacagattgcctcatctcttattatat
ggacctcctggaacgggtaaaacatcaactattcttgctgtggcacgtaagctttatgga
cctcagtaccataatatgatactggagatgaatgcatcagacgacaggggaattgatgtt
gtgcggcaacagattcaggattttgctagcactcagagtttctcatttggcgttaagtca
tctgtaaagttggttttattagatgagtcagatgccatgaccaaggacgcacaatttgca
ttgcgtagagtgatcgaaaagtacacaaagaatactaggtttgcacttatctgtaatcat
gtcaacaagatcattccagctttgcagtctagatgcacaagatttcgttttgctcctctt
gaccctattcatgttactgagagactcaaacatgtcattacggaggagaggcttgatgta
tctgagagtggcttggcagcagttgtccggcttagcaatggagacatgaggaaggcactg
aacattttgcagtcgacacacatggcttctcagcagattacagaagaagcagtataccta
tgtactggaaacccattgcccaaagacatagagcaaatatcttactggcttctgaacgaa
tcattttcagagagtttcaagcgaacctcagaaatcaaggcaaggaaaggattggccttg
gtagatatagtgagagaagtgacaatgtttgtttttaaaattaagatgccgtcaaatgtt
cgagttcagttgatcaatgatttggctgacatagagtataggttgagtcttgggtgcaat
gataagctgcagcttggatcacttattgcatcttttacacaagcccggtctgccctagtc
gcggctgcaaagtcgtaa
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