Tripterygium wilfordii (thunder duke vine): 119993134
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Entry
119993134 CDS
T07256
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
twl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119993134
03083 Polycomb repressive complex
119993134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twl03036
]
119993134
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119993134
Histone modification proteins
HAT complexes
HATB complex
119993134
HDAC complexes
Sin3A-HDAC complex
119993134
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119993134
PRC2.2
119993134
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119993134
Heterochromatin formation proteins
Other heterochromatin formation proteins
119993134
Chromatin remodeling factors
NuRD complex
119993134
NuRF complex
119993134
NuRF complex (fruit fly)
119993134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR35_TULP_N
eIF2A
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
119993134
NCBI-ProteinID:
XP_038696008
LinkDB
All DBs
Position
23:complement(10609438..10618013)
Genome browser
AA seq
489 aa
AA seq
DB search
MDPPAPKKRGRKPKPKDDKKEDQGSRMKEAKKSQPPTVDEKYTQWKSLVPVLYDWLANHN
LVWPSLSCRWGPQLDVATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQF
NEEARSPFVKKYKTIIHPGEVNRIRELPQNANIVATHTDSPDVLIWDVEAQPNRHAVLGA
TNSRPDLILTGHQDNAEFALAMSPAEPYVLSGGKDKLVVLWSIQDHITTSATDPSAAKSP
GSGGSIIKQDGNDKAADAPTVGPRGVYNGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWD
ARTGSGPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSVHMFDRRNLTSNGVGSPIFK
FEGHKAAVLCVQWSPHKSSVFGSSAEDGLLNIWDYDKVGKQSGSASESPSSPAGLFFQHT
GHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLLYRPEDEVLAELEKFKA
HVVECAAKT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatcctccagccccgaagaagagaggccgaaaacccaagcccaaggacgacaagaaa
gaagaccaaggcagcagaatgaaagaggccaagaaatctcagccacccaccgtcgacgag
aagtacactcagtggaagagtctcgtccccgttctctacgactggctcgctaatcataac
ctcgtctggccttctctctcctgccggtggggcccacagcttgatgttgcaacctacaag
aatcgccaacgcctttacttgtctgagcagactgatggcagtgttccaaatactctggtt
attgcaaattgtgaagttgtcaaaccgagagttgcagctgcagagcatatatctcagttc
aatgaagaagcacgctcaccatttgtaaagaagtacaagacaatcattcatccaggagag
gtgaacagaatcagggagctcccacagaatgccaatatagtggccactcatactgacagt
cctgatgttcttatatgggatgttgaagcacaaccgaaccgtcatgctgtccttggagct
acaaattctcgccctgatttgattttgactggacatcaagataatgcggaattcgctctt
gcaatgagtcccgctgaaccctatgtgctctctggagggaaagacaagttagtagttttg
tggagtattcaggaccatataacaacatcagccactgacccatcggcagccaagtcgcca
ggttctggtggatcaattattaaacaagatggaaatgataaagctgctgatgcccctact
gtgggacctcgaggtgtctacaatggacatgaggacacagttgaagatgtggctttttgt
ccatccagtgcacaggaattttgcagtgtaggtgatgattcttgccttatattgtgggat
gcacgtacaggctctggtccggtcgtcaaggttgaaaaggcacatgatgctgatctccat
tgtgttgattggaacccccatgatgataacctgattttgactgggtcggcagataattct
gttcacatgtttgatcgccggaatcttacttctaatggagttggatcacctatcttcaaa
tttgagggtcacaaagctgctgttctttgtgttcaatggtctccacacaagtcatctgtg
tttggaagctctgcagaggatggcctcttaaacatttgggattatgataaggtaggcaaa
cagtctgggagtgcatcagaatcccccagttctcctgctggcttgtttttccagcatact
ggtcacagggacaaagttgttgacttccattggaatgcatctgatccttggactattgtt
agtgtgtctgatgattgtgagaccactggtggaggaggaacattgcagatttggcgcatg
agtgatttactctataggccagaagatgaagttttggcagagctagagaagttcaaggcc
catgtggttgaatgtgctgctaaaacttga
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integrated database retrieval system
