Tripterygium wilfordii (thunder duke vine): 119993309
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Entry
119993309 CDS
T07256
Name
(RefSeq) serine/threonine-protein kinase VPS15-like
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
119993309
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
twl01001
]
119993309
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119993309
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
119993309
Protein kinases [BR:
twl01001
]
Serine/threonine kinases: Other
VPS15 family
119993309
Membrane trafficking [BR:
twl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
119993309
Autophagy
Autophagosome formation proteins
PI3K complex
119993309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
VPS15-like_hel
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
HEAT
WD40_CDC20-Fz
PK_Tyr_Ser-Thr
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_TEP1_C
EIF3I
HEAT_2
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
HEAT_EZ
WDR90_beta-prop_4th
Cohesin_HEAT
APH
Cnd3
Motif
Other DBs
NCBI-GeneID:
119993309
NCBI-ProteinID:
XP_038696304
LinkDB
All DBs
Position
23:complement(10186881..10196461)
Genome browser
AA seq
1541 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFFKTILCKHDEGLVLVKVYFKRG
ERNDLKEYERRLTEIKDTFLALDHPHVWPFQYWLETDKAAYLVRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHKNGICHGDIKCENVLVTSWNWLYLTDFASFKPTYIPYDD
PSDFSFFFDTVGRRLCYLAPERFYEHGGDMQVAQEAPLKPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQLLEKIPDSGVRKMVLHMIQLDSESRLSAESYLQDYAIVFPS
YFSPFLHNFYCCWNPLYSDMRVAMCQSVFHEILKQMTGNRSGEETDMGLSLSPDDRRGIV
STAKQKVDHTKDPQGEKGLVHDRSKLANINILFGDIKQNHHSCDVKLTLDSGPATAFSQN
LKKCSMQSPGELLQSISNAFGRNGHLFMKRITMNHLSALISEYNSQSDTFGMRFLPTPGD
GMRCEGMVLIASLLCSCIRNVRLPHLRRVAILLLKSCSLYIDDEDRLQRVLPYVIAMLSD
PAAIVRCAALEALCDILPLIQDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAK
LALTAYGFLMHSIRLSEAGVLDELSPSGKAFSSSSETFGQLHRVNGDAQLVQLRKSLAEV
IQELVMGPKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILPAFLNDQDELLRAVFYGQ
IVYVCFFVGQRSVEEYLLPYIEQALSDPTEAVIVNALDCLAILCKSCFLRKRILLEMIEH
AFPLLCYPSQWVRRSAVCFISSSSDSLGAVDSYVFLAPLISPFLCRQPASLASERALLMC
LKPPVSRQVFYQVLENARSSDMLERQRKIWYSSSAESKQWDTLDFLKREVEDISSVKSWP
DKQHYSEGQEPGRTVHPIEPTEFDDDAEKLRYVGSIMYNGSSTADILDPLSSEKLQFSGF
MPPRASGVNSFMYDKSSEGIPLYSFSRDKRQVKIPSMASDSPSLDNYIGIGSSSMPWMDP
VNKSFSLSSSVPVPKLVSGSFSISGGSKQFHRVVHEPEGRENDQISNVSSKFQELSLSDS
SKGSTSAEDASAPDMLGLPSFARTTLVPDSSWRPRGVLVAHLQEHRSAVNAIAVSNDHSF
FVSTSDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGLCTVMLPNSARVIVGACDGMMHL
FSVDRVSKGVGNVVEKYSGIADIKKKDIKEGAILSLLNYSAENCASHMVMYSTQNCGIHL
WDIRENSDAWTLKSVPEEGFVSSLVAGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSL
VCPIEKMCLFAPPPHASLATTTRPLVYVSAGCNEVSLWNAENGSCHQVLRVANYDADTGL
SDMPGASSRPSKANNSRADLRRNLNPKYRVDELNELPPRLPGIRSLLPLPGGDLLTGGTD
LRIRRWDHCSPDRSYYMCGPNLKGVGNDDFYETRSSFGVQVVQETKRRPLTTKLTGKAVL
AAAATDPAGCHRDSILSLASLKLNQRLLISSSRDGAIKVWK
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaagatcgcccgcacgactcaggtctcggcgtcggagtactacctccacgac
ctgccgtcgtcgtacaatttggtgctaaaggaggtccttgggcgaggtcgattcttcaag
acgattctgtgtaagcacgacgagggactggttcttgttaaggtctactttaagcgtggt
gagcgcaatgatctcaaagagtacgaacgccgcttgactgagatcaaggacaccttcctt
gcccttgaccaccctcatgtttggccctttcagtattggctagaaacagataaagcagct
tatctcgtgaggcaatacttcttcaacaatcttcatgatcgacttagcactcgacctttt
ctaagtcttgtggagaagaagtggttagcttttcagctactacttgccgtgaaacagtgc
cacaagaatggaatttgtcatggtgatattaaatgcgagaatgtattggtcacttcctgg
aattggctgtaccttactgactttgcatcattcaaacccacctacatcccctatgatgat
ccttcagatttctcctttttctttgacactgtcgggaggaggctctgttatcttgctcct
gaaagattttatgagcatggaggtgatatgcaagttgctcaagaagctcccttaaagcct
tctatggacatctttgctgtagggtgtgtaattgcagagctttttctcgagggtcaacct
ttgtttgaactctctcagcttcttgcttatcgcaggggacaatatgatcctagtcaactt
cttgaaaagattccagattctggagtacggaagatggtacttcatatgattcagttggat
tcagagtcacgactttctgctgaaagctacctgcaggattatgctattgtttttcccagc
tacttctcgccatttctgcataatttttactgctgctggaatcctctttattctgatatg
agggttgcaatgtgccagagtgttttccacgagatactaaagcaaatgacaggcaatagg
tctggtgaggagacagatatgggacttagcctatctccagatgacaggaggggcattgta
tcaaccgcaaaacaaaaggttgaccatacgaaggacccacagggtgagaaaggtttagtt
catgacagatccaaacttgccaatatcaacatcctgttcggagacataaaacaaaaccat
cactcttgcgatgtaaagctgacactagatagtggtcctgctactgcattttcccaaaat
ctcaagaaatgtagcatgcaatctccaggagagcttcttcaaagcatctccaatgcattt
gggagaaatggtcatctattcatgaaaaggattacgatgaatcatttgagtgccctgata
tctgagtacaatagccaatcagacacttttggcatgcgttttcttccaacacctggagat
ggtatgagatgtgaaggaatggttctgattgcctctttgctctgttcctgcatacgaaat
gtgaggttgcctcatttaaggagggtggctatacttttgttgaagtcttgttcattatac
attgatgatgaagatcgcttgcagcgggtgcttccatatgttattgcaatgctttctgat
ccagcagcaatagtgcgctgtgcagccttggaagcattgtgtgacattctgcctttaatc
caggattttccgcctagtgatgcaaaaatctttcctgagtatattcttcctatgctttct
atgctgccagatgatccagaggaaagtgtgagaatatgttacgcgagcaatatcgcaaaa
cttgcactcactgcatatggattcctgatgcactcgatacgcttgagcgaggctggggtt
cttgatgaattgagtccatcaggtaaggcgttttcatcatctagtgagacttttggacag
ctgcatagggtgaatggtgatgctcagcttgtacaactgagaaagtcattagctgaggtc
attcaagaacttgtgatgggtccaaagcagactccaaatatcagaagagccctccttcag
gacattggtaacctttgttgcttctttggtcagaggcagagtaatgacttcctcttaccc
atccttccagcatttcttaatgatcaagatgagctgctgagggcagtattctatgggcaa
attgtgtatgtctgtttctttgtcggccaacgaagcgtggaggaatatcttctaccttat
attgagcaagctttaagtgatccaacggaggctgtcattgtcaatgctttggactgtttg
gccattttgtgcaaaagttgtttcttgcggaagaggatactacttgagatgatagaacat
gcttttccattgttatgttatcctagtcaatgggtgagaagatcagctgtctgttttatt
tcatctagcagtgacagcttaggtgcagtggattcatatgtgttccttgcacccttgata
agcccttttctttgcagacaaccggcatctctagcttctgagagggccctcctcatgtgt
ttgaagcctcccgtctcgaggcaggtgttttaccaagtcctggaaaatgccaggagctca
gacatgttggagaggcaacgaaagatatggtacagttcatcagcagagtccaaacaatgg
gacactttggactttcttaagagagaggtagaggatataagttcagtgaagagttggcct
gacaaacaacactattctgagggtcaagaaccaggtagaactgtgcatccaatcgagcca
actgaatttgatgatgatgcagaaaagttgagatatgtgggaagcatcatgtacaatggg
tctagtactgctgacatccttgatcccctaagctcagaaaaattacagttttcaggcttc
atgcctccacgagctagtggtgtgaatagttttatgtatgataagtcctcggaaggcata
cccttgtactcctttagcagggacaagcgccaagtgaaaattccttcaatggcttctgac
tccccatcactagacaattacataggaatcggttcgtcatccatgccttggatggatcct
gtaaataaatcatttagcttgtctagttcggttccagtgcctaagcttgtttcaggttca
ttcagtatcagtggtggttctaaacagtttcatagagtggtacatgaaccagaaggcagg
gaaaatgatcaaatatctaatgttagtagtaaatttcaagagttgagcttatctgattca
tcgaaagggagtactagtgcagaagatgcttctgctcccgatatgttgggattgccatct
tttgcgcgaacaacgctggtaccagattccagttggaggcctcgaggggttttagttgca
caccttcaggagcaccgttctgcagttaatgccattgcagtatcaaatgatcatagcttt
ttcgtgagtacatcagatgattccactgtcaaggtgtgggattcaagaaagttggagaaa
gacatctcatttaggtcgaggctgacatatcacctggaaggaagccgaggactgtgcacg
gtaatgctccccaactctgctcgagtcattgttggagcgtgtgatggaatgatgcattta
ttttctgtcgatcgtgtctccaaaggagttggcaatgttgttgagaaatattcaggcatt
gctgatataaaaaagaaggatatcaaggaaggtgccatactaagccttctgaactactca
gctgaaaattgtgccagtcatatggttatgtacagcacccaaaactgtgggattcatctt
tgggatattagggaaaattcagatgcatggactttaaaatcagttcctgaggaaggcttt
gtgtcttctttggtagcaggcccctgtggaaattggtttgtttcagggtcatctaggggt
gtgcttactctttgggacctgaggttcctcgtacctgtgaactcatggcaatattctctt
gtatgccccatagaaaaaatgtgcctgtttgctcctcctccacatgcctctcttgctact
acgacaagacctcttgtctatgtttctgcaggttgtaatgaagtgtcactttggaatgcg
gagaatgggagctgccatcaggtgctgagggtggcaaattatgatgctgatactgggctg
tctgatatgccaggggcatcgtctaggccatccaaggcaaataattctagagcagatttg
aggcgaaatctgaatcctaagtacagagttgatgaacttaatgaacttcctcctcgtctt
cctggcatccgttcgttgcttcccttacctgggggtgatttattaactgggggtaccgac
ttaaggatccgtcggtgggaccattgcagtcctgatcggagttactacatgtgtgggccg
aatttgaagggcgttggaaatgatgatttctatgaaacaagatccagttttggggtacag
gttgtccaggagacgaagagacgccctctgacaaccaagttgacaggaaaggcagttctt
gcagctgctgcaactgaccctgctgggtgccaccgggattccatcctatccttggcctct
cttaagttaaaccagagactcttgatttcaagtagtagagatggggcaatcaaggtttgg
aagtaa
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