Tripterygium wilfordii (thunder duke vine): 119993365
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Entry
119993365 CDS
T07256
Name
(RefSeq) probable alpha-mannosidase At5g13980 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
119993365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119993365
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
119993365
Membrane trafficking [BR:
twl04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
119993365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
119993365
NCBI-ProteinID:
XP_038696411
LinkDB
All DBs
Position
23:complement(1997339..2006996)
Genome browser
AA seq
1022 aa
AA seq
DB search
MEVKVCFFLAILLWVLSYGESKYMIYNTSQPIVPGKLNVHLVAHTHDDVGWLKTVDQYYV
GSNNSIQGACVQNVLDSLIPALLADENRKFIYVEQAFFQRWWRNQREAMQNVVKRLVRSG
QLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKEEFGVTPRIGWQIDPFGHSAVQAYLL
GAEVGFDSFFFGRIDYQDRAKRKNEKSLEVVWRGSKSLGSTSQIFAGAFPENYEPPPGGF
YFEVNDPYPVVQDDIDLFDYNVPERVNDFVAAALVQANITRTNHIMWTMGTDFKYQYANS
WFRQMDKFIHYVNMDGRVNALYSTPSIYTDAKYATGESWPVKTEDFFPYADRANAYWTGY
FTSRPALKRYVRMMSGYYLAARQLEFFRGRSSTGPSTDSLADALAIAQHHDAVTGTEKQH
VANDYAKRLSMGYSAAEELVAYSLACLAESTPYTGCQNPSVKFQQCPLLNISYCPPSEIN
LSHQKNLIVVVYNALGWKREDVVQIPVNDEDLTVRDFEGREIESQVIPLTNVHVSLRNFY
VQAYVGRTPNVTPKYWLAFPVSVPPLGFSTYTISAKAAGVLSTKSSVHKFRKDEKSNIEI
GQGKLKLIFSEDQGRMIYNNNKISVQESVEQSFSFYAGYNGTLDKKSPQNAGAYIFRPNG
TFSIEPEGQVPLTVTRGPIVDEVHQQVNRWIYQITRLYKGKEHVEVEFFVGPIPVDDGIG
KEVATQITTKIENNKTFYTDSNGRDFIRRIRDFRTDWDLEVNQPAAGNYYPINLGIYIQD
SKKEFSVLVDRALGGSSIVDGQIELMLHRRLLLDDSRGVAEALNETVCVRDECVGLTIQG
KYYYRIDPLGEGAKWRRSFGQEIYSPLLLAFAEEDGDNWTSSHVSTFSGIDSSYSLPDNV
AIITLQVLNDDGNILLRLAHLYEIGEDGDLSGMANVELKKLFPGKKIRKATEMSLSANQE
RSEMEKKRLVWKVEGSPGEEAKAVRGGPVDPTKLVVELAPMEIRTFVIDIDYTSIHREVF
DS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcaaagtttgcttctttttggctattctattatgggttctttcatatggggag
tccaagtacatgatctataatacttcacagcccatagttcctgggaagctcaatgtccac
ttggtcgctcacacccacgatgatgttggttggctcaagaccgtggaccagtactacgtt
ggttccaacaattctatccagggggcttgtgtgcaaaacgtattggattctttgatacct
gcgttgttggcagacgagaatcggaagttcatttatgttgaacaggcatttttccagaga
tggtggagaaatcagagagaggctatgcagaacgtagtcaagcggcttgtcagatcaggt
caactagagttcatcaatggcggtatgtgcatgcatgatgaggcagtgacgcattacatt
gacatgatagatcagacaactcttgggcatcggtttatcaaggaagagtttggtgtgact
ccgagaattggttggcaaattgacccgtttggacattctgcagtgcaggcttacttgttg
ggcgcagaagttggatttgactcctttttctttggccggatagattaccaagatagagct
aagcgtaaaaatgagaaaagccttgaagtcgtctggcgtggttcgaagagtcttggttca
acctcacagatttttgccggtgcatttcctgaaaactatgagcctcctcctggaggcttc
tatttcgaagtcaatgatccctaccctgtggttcaagatgacattgatttgttcgattac
aatgttccggaacgagttaatgattttgttgctgctgctctagtacaggctaacatcact
cgaacaaatcatataatgtggaccatggggacagattttaagtatcagtatgcaaactcg
tggttccgacagatggacaagttcattcattatgtaaacatggatgggcgtgttaatgct
ctgtactctacaccatccatttataccgatgcaaaatatgctacaggtgaatcatggcct
gtaaagactgaagacttttttccttatgcagatcgtgcaaatgcttattggactggatac
tttacaagcagaccggccctgaaacgctatgttaggatgatgagtggctactatttggca
gcaagacagctggagttttttagaggaagaagcagcacagggcccagcacagactcgtta
gcagatgctttagcaattgctcaacatcatgatgcagttactgggacggaaaagcagcac
gtggccaatgattatgcaaagcgactgtcaatgggctacagtgcggctgaagagttagtt
gcatattcacttgcttgcttggctgagtcaacaccatatactggatgtcagaacccttct
gtgaaattccaacagtgccctcttctgaatataagttattgtcctccatcagagatcaat
ctttctcatcagaaaaacttgattgttgtggtctacaatgctcttggatggaagagagaa
gatgttgttcaaattcccgttaacgatgaagatcttactgtacgtgattttgagggaaga
gaaattgaatcacaagttattcctctgaccaatgtccatgtgagcctaaggaatttttat
gtccaagcgtacgtgggtcggacccctaatgtgacacccaagtactggcttgcatttcca
gtctcagttcctcctcttggttttagcacttatactataagtgccaaagcagcaggtgtt
ctttcaaccaaatcatctgtgcacaaattccgcaaagatgaaaaatctaatattgaaatt
ggtcaaggaaagttgaagcttatcttttctgaggatcaaggcagaatgatttataacaat
aacaaaatttcggttcaagaatctgttgaacagtccttcagtttctatgctggatataat
ggaactttagataagaaatctcctcagaatgctggagcatatatcttccgtccgaatggc
acgttttccatagagcctgaaggacaggtgccgttgactgttacacgtggaccgatagta
gatgaagtccatcaacaagtcaatagatggatataccagatcaccagactgtacaaggga
aaagagcatgttgaagtcgagttttttgttgggccaattcctgttgacgatggaattggt
aaagaagttgcaacccaaattacaactaaaatagaaaacaacaaaacgttctacacggat
tctaatggacgtgattttatcagaaggattcgtgattttagaacagactgggacctggaa
gtgaaccaacctgctgccggaaattattacccaattaatcttgggatttacattcaagat
agtaagaaggaattctcggttctggttgatcgtgctcttggaggatctagcatagtggat
ggacaaatagagcttatgctccacaggagactgctacttgatgattccaggggcgttgct
gaggctctaaacgaaacagtctgtgttcgtgatgaatgcgtggggttgacaattcaaggg
aaatattactacaggatcgatcccctaggagaaggtgcaaagtggcgtcgctcttttgga
caggagatttattccccactcttgctagcatttgccgaagaggatggagataactggaca
agctcgcatgtctccacgttctcagggattgattcctcatatagtttacctgataatgtc
gcaattataactctccaggtgctcaatgacgacggaaacattctccttcgtttagcgcat
ttatatgagattggagaggacggtgatctttcaggaatggcaaatgtggaactgaagaag
ttgttcccaggcaagaagattcgcaaagctacagagatgagcttatcagcgaatcaagaa
agatcggaaatggagaagaagaggctggtctggaaagtagaaggttctccgggcgaggag
gccaaggcagtgaggggtggaccagttgatcctacaaaactggttgtggaattagctccc
atggaaatccgtacctttgttattgatatcgattacacgtccatccaccgcgaggtgttc
gatagttag
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integrated database retrieval system
