Tripterygium wilfordii (thunder duke vine): 119993406
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Entry
119993406 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119993406
03041 Spliceosome [BR:
twl03041
]
119993406
03036 Chromosome and associated proteins [BR:
twl03036
]
119993406
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119993406
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119993406
mRNA cycle factors
Common to processing body (P body) and stress granule
119993406
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119993406
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119993406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
119993406
NCBI-ProteinID:
XP_038696475
LinkDB
All DBs
Position
23:complement(1562483..1568401)
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AA seq
612 aa
AA seq
DB search
MRTSWADMAANSGADNAAPGSANNRGISNTSASARSAYVPPHLRNRPASSDPPAPAYSGP
ASSNDRAGYGGPRWAGSKNDFRSGYGGGLVGGLGNRGGGWDRGREREANPFGDVDETEEA
FSEQESTGINFDAYEDIPVETSGDNVPPSVSTFAEIDLGEALNQNIRRCKYVKPTPVQRY
AIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQGQSTHRPLRGSRTAYPLALILSP
TRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDMERGVDILVATPGRLVDLLERA
RVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQCDMPPQGVRQTMLFSATFPKEIQRLAS
DFLSSYIFLAVGRVGSSTDLIVQRVEFVQESDKRSHLMDLLHAQRTNGVQGKQALTLVFV
ETKKGADSLEHWLSVNGFPATTIHGDRSQQEREQALRSFKSGNTPILVATDVAARGLDIP
HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNGSLAKSLSDLMQEANQEVP
AWLSRFAARSYGGGRNRRSGGGRFGGRDFRKDSSFNRGGSDYYGGGYSSSSGLGAPSGYG
GGYAPGVTSAWD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcgtgggcggacatggctgcaaactccggggctgacaatgctgctcctggg
tctgcaaacaataggggtattagtaacacttctgcatctgcacgatcagcatatgttcct
ccccatcttcgcaatcggccagcctcttcagacccacctgctccggcttactctgggcct
gcctcaagtaatgatcgagctgggtatggtggacctcgttgggctggttccaaaaatgat
tttcgttctgggtatggaggtggtctagtaggaggattgggtaacagaggtggtggctgg
gaccgtgggagagagagggaagctaacccatttggtgatgttgacgaaacagaggaggct
ttcagtgagcaggaaagcactgggattaactttgatgcatatgaggatattccagtggag
actagtggggataatgtaccaccatctgtgagtacatttgcggagattgaccttggggaa
gcactcaatcagaatatccggaggtgcaagtatgtcaaaccgacacctgtgcagcggtat
gccatcccaatctcacttgcggggcgggatttgatggcatgtgcccagactggttctggc
aagacagctgctttctgtttcccaattatcagtggaattatgaagggacagggacagagt
acacacagaccattacgtgggtcacgcacagcgtacccacttgctctcattctttctcca
actcgggagctttcatgccaaatacatgaggaagctaagaagttctcataccaaaccggg
gtcagggtggttgttgcttatggaggagctcctattaatcagcagctgcgagacatggag
agaggtgttgatatcctagtggctactcctggaagattggtggatttgttggagagggct
agagtttctttacaaatgatcaggtatctagctttggacgaggcagatcgaatgttggat
atgggttttgagcctcaaatcagaaaaattgtggaacaatgcgacatgcctccacaaggt
gtcagacagacaatgttgttcagtgctacctttccgaaagagatacagagattggcctct
gattttctttcaagttatattttcttggctgttggacgagtcggttcaagtaccgattta
atagtccaacgagttgaatttgttcaagagtcggacaagaggagtcatctcatggacctt
cttcatgcacaaaggacaaatggtgtccagggcaagcaagctttgactttagtttttgtg
gagacaaagaagggagccgattcacttgaacactggttgtcagttaatggtttccctgcg
actactattcatggtgataggtcacaacaggaaagagaacaagcattgcggtcatttaaa
agtggcaacacaccaattttggtggcaacagatgtggcagcacgtggtcttgacattccc
cacgttgctcatgttgtcaactttgatctaccaaatgatattgatgattatgtccatcga
attggtcgaacagggagagctggtaaatcaggtttggctactgcctttttcaatgagaac
aatggatcgctggcaaagtcattatctgatctaatgcaagaggcgaatcaagaagtacct
gcttggttatctcggtttgcagcgcgttcttatggcggagggaggaatcgtcgttcaggg
ggaggccggttcggcggccgtgattttcgaaaggactcttctttcaataggggtggttca
gattactatggtggaggctacagcagtagcagtggattaggggctccaagtggttatgga
ggagggtatgccccgggggttaccagtgcgtgggattaa
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