Tripterygium wilfordii (thunder duke vine): 119993501
Help
Entry
119993501 CDS
T07256
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119993501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119993501
03009 Ribosome biogenesis [BR:
twl03009
]
119993501
04131 Membrane trafficking [BR:
twl04131
]
119993501
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twl04147
]
119993501
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119993501
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119993501
Membrane trafficking [BR:
twl04131
]
SNARE
SNARE associated proteins
Others
119993501
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119993501
Exosome [BR:
twl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119993501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
AAA_18
AAA_lid_PRS2_C
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
Vps4_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
119993501
NCBI-ProteinID:
XP_038696588
LinkDB
All DBs
Position
3:complement(10392703..10397450)
Genome browser
AA seq
805 aa
AA seq
DB search
MSNQAESSDAKGTKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKNTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQI
FKSCLRKSPVSKDVDLRALAKYTNGFSGADITEICQRACKYAIRENIEKDIERERRKDNP
EAMEEDAEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAEA
STGGAAASDPFAASAGGADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaagctgaatcctccgacgctaagggaacgaagaaggacttcagtaccgcc
attctcgagcggaagaaggcggcgaatcgcttggtcgttgatgaggctgtcaacgatgac
aactccgtcgtggcactccacccggataccatggagaagctccaactctttcgtggagac
acgatcttgattaagggtaagaaaaggaaagatacaatctgcattgcccttgctgatgat
acatgtgatgaaccaaagatcaggatgaacaaggttgtgaggtctaaccttagggttagg
cttggggacgttgtttctgtgcaccagtgtcctgatgttaagtatggaaagcgtgtgcat
attctgcccgtggatgacacaatagaaggagttaccggaaatctgttcgatgcatatttg
aaaccatatttccttgaggcataccgcccagtaaggaagggtgatctttttctcgtgaga
gggggaatgagaagtgtggagttcaaggttattgagactgaccctccagaatactgtgtg
gttgcccctgacacagagattttttgtgagggagaacctgtgagaagggaggatgagaac
agattggatgaggttggttatgatgatgttggtggtgttagaaaacagatggctcagatt
cgagagttggttgaacttccattgaggcatccacagctatttaaatcaattggtgtaaag
ccacctaaaggaatccttctgtacggaccacctggctctggaaagactctgattgctcgg
gctgttgctaatgagacgggtgctttctttttctgtataaatggaccagagataatgtca
aagttggcaggggagagtgaaagcaatctcaggaaggcattcgaggaagcagagaagaat
gccccatccattatattcattgatgagattgactcaattgcacccaagcgagagaagaca
catggagaagttgagaggaggattgtctcccagctcttgacgctcatggacgggcttaaa
tcacgtgctcatgtcattgttattggggctacaaatcgtcccaacagcatcgacccagca
ctgagaaggtttggaagatttgacagggaaattgatattggtgtaccagatgaagttggg
cgccttgaggttcttcgtattcatacaaagaacatgaagcttgctgaggatgttgacttg
gaaagaatttcgaagaatacccatggttatgtgggtgctgatctggcagctttgtgtacc
gaggctgctctccaatgcatcagggaaaagatggatgtaattgacttggaagatgaaaca
attgatgctgagatactgaattccatggcagtaagcaatgaacacttccagactgctctt
ggaacaagtaatccttctgctttgcgcgaaacagttgttgaggtgcctaatgtcagttgg
gaagacattggtggtcttgagaatgttaaaagggagcttcaagagactgttcaatatcct
gtggagcatcctgagaaatttgagaagtttggaatgtctccctctaagggagttcttttc
tatggtccacctggatgcggtaaaactctcctggcaaaagctattgcaaatgaatgtcaa
gcaaactttattagtatcaagggtcctgaattgctcaccatgtggttcggagaaagcgag
gcaaatgtacgagaaatttttgacaaggctcgccagtctgccccttgcgtcctatttttt
gatgaacttgactctattgctactcagagagggagcagtgtaggagatgctgggggtgct
gctgacagggttttgaaccagcttctgactgagatggatggcatgtctgcaaagaaaact
gttttcatcatcggtgcaacaaatagaccagatattatagatcctgcacttcttcgtcct
ggtcgtcttgatcagttgatctatatcccgctacccgatgaggaatctcgtcttcaaata
ttcaaatcttgcttgaggaagtccccagtatccaaagatgttgacctcagagcgctagcc
aagtacactaatggattcagtggtgctgatatcacggagatatgccagcgtgcttgtaaa
tatgctattagagagaacattgagaaggatattgagagggaaaggaggaaggataaccca
gaggctatggaggaggatgcggaggatgaagttgcagaaatcaaggcagcacattttgag
gagtcaatgaagtatgctcgcaggagtgtgagcgatgctgatattcgtaagtaccaggca
tttgctcagaccttgcagcagtccagaggatttggaactgaattcagatttgctgaagca
agcactggtggagctgcagcatccgacccattcgctgcctctgccggtggcgccgatgaa
gatgacctttatagttag
DBGET
integrated database retrieval system
