Tripterygium wilfordii (thunder duke vine): 119993571
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Entry
119993571 CDS
T07256
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119993571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119993571
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119993571
mRNA degradation factors
5'-3' decay
Lsm complex
119993571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
119993571
NCBI-ProteinID:
XP_038696684
LinkDB
All DBs
Position
23:10954228..10958292
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIFLSTSLASYLDKKLIVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDITLGLYVIRGENVVLIGELELDKEELPPHMTCVSAAEIKRAQKAEQDAMALKGSMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggctggcccagaagatatcttcctctccacttcgcttgctagctatcttgat
aaaaagctcattgtcttgcttcgagatggtagaaaactcttggggttgctgaggtctttt
gatcaatttgcgaatgttgttcttgaaggtgcatgcgaacgagttattgttggtgacctt
tactgcgacatcaccttaggcctctatgtaatccgtggggagaatgttgtcttgattgga
gagctggaacttgataaggaagaacttcctccacacatgacttgtgtgtcagctgcagag
attaagagggctcaaaaggctgaacaggatgctatggctctgaagggctccatgaggaaa
agaatggaattcctggattttgattaa
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integrated database retrieval system
