Tripterygium wilfordii (thunder duke vine): 119995013
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Entry
119995013 CDS
T07256
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
119995013
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
Other 90S particles
119995013
Pre-60S particles
Other pre-60S particles
119995013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
119995013
NCBI-ProteinID:
XP_038697298
LinkDB
All DBs
Position
3:8902777..8915365
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AA seq
1183 aa
AA seq
DB search
MTMKPELHHQKLQSTREAEEEDILNDDGTDICEQLMVRYAASAAPQHRHLLATAAALRAM
LDSETLSFTPNSYFLAAVNNLSDVESLDATAVSALLSFLGIVVPLMIPKEGIKAEKARDA
VGVLVAVVEREGLGVASVKGVVKCLGALMVGFCDLEDWDSVELGFQTLLKFSIDKRPKVR
KCAQDCLEKVFRSFSSSGAIQEASKLILSLFKSYMPLAVEISNIKVLNASRDEMLSRAEH
LELLHTLNVVKLTVPYLSAKISCKVLSELHQIMNSEFSLVTRHVFNIIGVFYETSKVEGI
IPKADKIIASLAAYVFLWEKNPADTVLAAATLLKSTLDQAHSAESTSWFKNIRLVWETIT
GLLTSEASTASWASGIMKELIDHHIDPKVFIPDENQSLEDVSQESEGAGIIQSICIILEN
TLSSCDGIPNEHILGVLSALFCKLGKLAVIFMKGIVIKLGDLMDIACGNTSKTAHLQSCI
GSAVTALGPESMLNILPISLHADEVTYSNTWLIPILKDHIVGASLGYYMEHIVPLAKSFQ
QASRRAKKSVIGQDLQDHAHVLWGLLPAFCRYPVDTHQNFGLLAEVLVTFLRKRSFMHES
VAVALQVLVNQNRSVLCSEADKPCTDEIKDSTLEVRIVPFYSKKTATRNIRALASSSTKL
LQALINLFIKSRPEKQSYLKDAIGCLASITDSSTTKKILTLLLERFQFINSKGEFEKLGG
ENPEMIAKAQGDLKATQKHSQRCIIMNVASSLVEGANEDLIHLIYDFIVYTFQETETVGH
CEAYHSLSRILEEHAWFCALRSTELIDLLLRLKPPVDVVSLRNRFACFQPLMFNLLKVET
SLPMSLEAEDTKAFCILNEIIITLKDSDDEGRKVAYDVLITICHTLKRSSNVTSNDPYQK
LINMMMGYLSGSSPHITSGAVSALSVLVYQDADICLCVPDIVSSILSLLSSKAVEVIKAA
LGFVKVLVSCLQANDLQNILSDVLSGVLPWSSVSRHHFRSKVTVVIEILIRKCGFAAVEF
VTPGKYKGFIKTVSQNRHGKSSSNEAGTTDADTVLEDSPSDRSKKRKHKELGAPHAEDVS
INPRKRNKEKKYNPAFPNSREPHKFSGDGSNGRSKWANKANHRKSLDHESEDIGKKNKRD
FYKSPSSGAKRRIGLRNMNKNGSAVHKPVSASRLYKKRRVGSE
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaaaccggaactgcatcaccagaagctacaaagtaccagagaagccgaagaa
gaagatatcttaaacgacgatggtactgatatttgtgagcaactcatggttcgttacgca
gcctcggcagcaccacagcaccgccacctccttgcgactgctgccgccctacgcgcgatg
cttgactccgaaaccctttcttttacccccaattcctactttctcgctgccgtcaacaac
ctctccgacgttgaatccctggacgcgacggcggtttctgctctgctgtcgtttttgggg
attgtggtgccattgatgatccccaaggaggggattaaggcagagaaggcgagggatgcg
gtgggcgtgcttgtagctgtggtggagagggagggattgggggtggctagtgtgaagggt
gtagtgaagtgtttgggggctttgatggtggggttttgcgatttggaggattgggattcc
gtggagctggggtttcagacgctgcttaaattctctattgataagcgtcccaaggtgcga
aaatgtgctcaagattgtctagagaaggtttttaggtcattttcgagctcaggcgctatc
caggaggcgagcaaattgatactgtctctgttcaagagttacatgcctcttgcagttgaa
ataagtaatataaaggtgttaaatgcttctagagatgaaatgttatcaagagctgaacat
ttggagctcctccatacgctaaatgtggtgaagcttacagttccctatctttctgcaaaa
atcagttgtaaagttctatctgagcttcatcagatcatgaattcagagttttcactagtt
acaaggcatgttttcaacattatcggagtgttctatgagacttcaaaagttgaaggtatt
attccaaaggcagataaaattatagcttcccttgctgcttacgtatttttgtgggagaag
aatccagcagacaccgtcttggctgcagcaaccttgctaaaaagcactttggaccaagct
cattctgctgaatcaacctcatggtttaagaacattcgtttagtttgggaaactattaca
ggtcttctgacttctgaggctagcactgcctcgtgggcttcaggtatcatgaaagagttg
attgaccaccacatcgacccaaaagtattcattcctgatgaaaaccaatcacttgaggat
gtaagtcaagagagtgaaggagcgggcattatacaatccatttgcattatccttgagaac
actcttagctcatgcgacgggattccaaatgagcatattttgggtgtcctttctgcgttg
ttttgcaagcttggaaagctcgccgtcatctttatgaagggtattgttattaaacttggc
gacttgatggatatagcttgtggaaacacatctaaaactgctcatcttcagagctgtatc
ggatcagcagtaactgcattgggtccagaaagcatgcttaacatcttacctatatctctt
cacgcggatgaggtcacttattcaaacacttggttaataccaatactaaaagatcatatt
gttggagcatcactgggatattacatggagcatatcgtgcctcttgcaaaatcctttcag
caggctagtcgtagagctaaaaagtcagtaattggtcaagatctgcaggatcatgctcat
gttctatgggggcttcttcctgcgttctgtcgctatcctgttgatactcatcaaaacttt
ggtcttctggctgaggttttggttactttccttaggaagcgctctttcatgcatgaaagc
gtagctgttgctttacaggtactggtgaatcaaaacagaagtgtactttgttctgaagcg
gacaagccttgtaccgatgaaattaaagattctaccttggaagtccgaatagtccccttt
tattcaaagaaaactgcaaccagaaacatcagggctttggcatcatcgtctaccaaattg
cttcaggctctaataaatctatttattaaatctcgtcctgagaagcaatcgtatttaaag
gatgccattggatgtttggcttctatcactgattcatctactacaaagaagatcttaacg
ttactgctggaaaggttccagttcattaatagtaaaggtgaatttgagaagttagggggt
gaaaatccggagatgattgctaaagcacaaggcgacctaaaagctactcagaaacattca
cagaggtgtataataatgaatgtggcttcttctctagttgaaggcgccaatgaggatctt
attcatttaatatatgatttcattgtgtacactttccaggaaactgaaacagttggccac
tgtgaagcttaccactctttaagtagaattttagaggaacatgcttggttttgtgctttg
cgatctacagagcttattgatttattgcttcgcctaaaacctccagttgatgtcgtatct
cttagaaatcgatttgcttgtttccagcctctcatgtttaacttgctgaaggttgaaacc
tctcttccgatgagcttggaagcggaagataccaaggcattttgcattttaaatgagatt
ataattacgctgaaggattcggatgacgaagggaggaaagtggcttatgatgtactcatt
actatatgtcacaccttaaaacgctcatcaaatgtcacttccaatgatccttaccagaaa
ctgattaacatgatgatgggatatctttctggttcatcacctcacataacaagtggagca
gtttcggcactgtctgtactggtttaccaagatgcagatatttgtctctgtgtgcctgat
attgtttcctctatcttatctttgctttcaagcaaagctgttgaagttattaaagctgct
ttgggctttgttaaagtgttggtgtcttgcttacaagcaaatgacctgcagaatattctg
tctgatgttttaagtggagtcctcccatggtcatctgtatctagacatcatttcaggtca
aaggtgacagttgtaatagagatacttatacggaagtgtgggtttgctgcagttgagttt
gtaactcctggcaaatataaaggttttatcaaaactgtatcgcagaatcgccatggcaag
tcaagttcaaacgaagctggtactactgatgcagacacagtgcttgaagattcaccttca
gacaggtcaaagaagaggaaacacaaggaactgggtgccccacatgctgaagatgtttct
ataaatcctagaaagagaaataaggagaagaaatacaatcctgcatttcctaactcaagg
gagccacataagttttctggtgatggtagcaatggaagatcaaaatgggctaataaggct
aatcatagaaaatcattggatcatgaatcagaagatattggtaagaagaacaaaagagat
ttctacaagagcccttcaagtggtgctaagagaaggattgggctgagaaacatgaataag
aatgggagtgcagttcataaacctgtatctgcttccagactctacaagaagagacgggtt
ggttccgaatga
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