Tripterygium wilfordii (thunder duke vine): 119995016
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Entry
119995016 CDS
T07256
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119995016
09122 Translation
03013 Nucleocytoplasmic transport
119995016
03015 mRNA surveillance pathway
119995016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119995016
03041 Spliceosome [BR:
twl03041
]
119995016
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119995016
Spliceosome [BR:
twl03041
]
Complex C
Other components
EJC/TREX
119995016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
119995016
NCBI-ProteinID:
XP_038697301
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All DBs
Position
3:1142786..1146879
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AA seq
684 aa
AA seq
DB search
MSSQYPILDNRPIDQWKVTELKEELKRRKLTTRGLKDDLIKRLAEALRIERENAAKEVDD
GFHLDPKPVVDVKNPELVSVVTETVKGPVDDVNVQVEVNDGAPTVIQGIVQEGSATASMK
SSRVEEEKLLDHSTGVETSNLVTETVVAEVALKEQDEQNYASHGDNGNINNQLENEDPKP
QLENEDSKPQLENEDSRPQLENEALKPPHEDPMLHSSAPNYQVSEVSPLLESPVKSDSIS
TDSVSINEKIELKDNIIDDNVKLELDVKPEIVGPSSSNLVAIGGESHPMDVEESHEKQAS
VEQKDDSNAVTEDMIIKNDSADVGYSEKLNLDRSSGDDSMEDDAVETKQIDSKYNDDELG
DKSAKNELPVKEESLVDVVGDDSSAGKKDILAESRIRPAMPAEKRKLNDQEAGGNTEPLK
RQRRWKSESLKVPEIKGSNSTPTTTPKGTFQSPGSKRNFSRSDSSLSEDAPKERVVPPSP
KPPTNSLRIDRFLRPFTLKAVQELLGKTGQVTDFWMDHIKTHCYVTYSSVEEAMETRNAV
YNLKWPSNGGCLLVAEFVDPQEVKIRVEAPQGPPHTPAVTVNNASTAPPAVITPQPSPSS
RQQFSMQQLPPPPPILPPPPPLSKPPQVRERLTIAQPLEKVDLPIVTLDDLFRKTKSTPR
IYYLPLSEEQVATKLAARSRATKQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcaatacccgattcttgataatcgtccgattgatcaatggaaggtcacagag
ttgaaggaagagcttaagagacgaaaactgactacccggggtttgaaggacgatttgata
aaacgtttggcagaagcacttcgcattgagagggaaaatgctgcaaaggaagttgatgat
ggttttcatttggatcccaaaccagtagtagatgtgaaaaatccagaattagtatcagtt
gttactgaaacagtcaagggtcctgtggacgatgttaatgttcaggttgaggtcaatgat
ggtgctccaacagtgattcagggaattgtccaagaagggagtgcaacagctagtatgaaa
tcttctagggtggaggaagagaagcttcttgatcattcaactggggtggaaactagcaat
ctagttactgaaacagttgttgctgaagtagcattgaaggagcaagatgagcaaaactat
gcaagtcatggtgataatgggaatattaataatcagctggagaatgaagatccaaagccc
cagctggagaatgaggattcaaagccccagctggagaatgaggattcaaggccccagctg
gagaatgaggctttaaagccccctcacgaggatccaatgcttcattcttctgctccgaac
taccaggtatctgaggtcagcccccttttggagtctccagtaaaatctgattctatttct
actgattctgtgtcaattaatgaaaaaattgaactaaaggataatataattgatgataat
gttaaattagaactagatgttaagcctgagatagtgggaccatcatccagcaatcttgtt
gccattggtggcgaatcacatccaatggatgtggaagagtcacatgagaagcaggcatct
gttgaacagaaagatgacagcaatgctgtgaccgaagacatgatcataaaaaatgatagt
gcagatgtagggtactcggaaaagttaaatttggacagaagctctggtgatgactctatg
gaggatgatgccgtggaaactaaacaaattgattcaaagtataatgatgatgagttgggg
gacaagagtgcgaaaaatgaattgcctgttaaggaggaaagtcttgttgatgtggtggga
gatgactcgtctgcaggcaaaaaagatatccttgctgagagtaggattcgtcctgccatg
cctgctgagaaaaggaaacttaatgaccaagaagccggcgggaacactgagcctctgaag
aggcagcgcagatggaaatctgagtctcttaaagttcctgaaatcaaagggtccaattcg
acgcccaccaccacccctaagggcacatttcagtctcctggttctaagcgcaatttctct
agatcggactcttctcttagcgaagatgctccaaaggaacgtgttgttccaccatcgcca
aaacctcctacaaattctcttagaattgatcgttttctgcgaccttttaccctcaaagct
gtccaagagctgctgggcaaaactgggcaagttacagatttctggatggaccacattaag
acccattgttatgttacttattcttcagtggaagaagccatggagacacggaatgctgtt
tataacctaaaatggccttctaatggtggatgccttctagtggctgagtttgttgaccct
caggaagtgaaaattcgagttgaggctcctcaaggtcctccacataccccagctgtaact
gtcaataatgcttctactgctcctccagctgtgattacgccacagccatctccgtcctcc
cgtcaacagttttctatgcaacagctgcctcctcccccacctatcctccctcctccacca
ccactctctaagccgcctcaagttagagagcgactcactattgcacaaccgttggagaaa
gttgatctaccaattgtcactttggatgatctcttcaggaaaacgaaatcaactccgcgg
atttactatctaccactatcagaagaacaagttgccacaaaacttgcagcacgcagcaga
gccaccaaacagtag
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