Tripterygium wilfordii (thunder duke vine): 119995038
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Entry
119995038 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119995038
03041 Spliceosome [BR:
twl03041
]
119995038
03036 Chromosome and associated proteins [BR:
twl03036
]
119995038
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119995038
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119995038
mRNA cycle factors
Common to processing body (P body) and stress granule
119995038
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119995038
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119995038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
119995038
NCBI-ProteinID:
XP_038697324
LinkDB
All DBs
Position
3:11970451..11975794
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AA seq
608 aa
AA seq
DB search
MRTSWADSVANSASENAATGSSQSNGPSRPTRSTYVPPHLRNRPSADSVAPLAANDRFGY
SAPVGGSRWAGGSSGYAGRPGYGTGSRNGGGWNGRNDGWDRSRDREVNPFGDDDDVEQAP
DEQVNTGINFDAYEDIPVETSGDNVPLPVNTFAEIDLGEALNQNIQRCKYVKPTPVQRHA
IPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQFLQRPRGARIVCPLALILSPTREL
SCQIHDEAKKFSYQTGVKVVVVYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSL
QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGTRQTMLFSATFPKEIQRLASDFLS
KYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQKENGSHGKQFLTLVFVETKK
GADSLEQWLCMNGFPATTIHGDRTQQEREMALRSFKSGRTPILVATDVAARGLDIPHVAH
VVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDSNLSLARPLADLMQEANQEVPEWLT
RYASRASYGGGKNRRSGAGRFGGRDFRREGSFNRGTDHYGGGNNGGGYGVPGGYGGGGYA
SGVTSAWD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcatgggcggattctgttgctaactctgcatctgagaatgcagccactggt
tcctcacaaagtaatggcccgtctcgacctactcgttctacttatgttcccccacacctt
cgtaacaggccttcagcagattctgtggctcctttggcagccaatgaccggtttggttac
agtgcacctgttggtgggtcacgttgggctggtggctctagtggttatgccgggcgtcca
ggatatggtacaggaagtcgtaatggtggtggttggaatggtagaaatgatgggtgggac
cgcagtagagatcgtgaggtgaacccatttggtgatgatgatgatgtggagcaagcccct
gatgagcaagtgaacacgggcattaattttgatgcatacgaggatattccagttgagaca
agtggtgataatgtgccccttcctgtcaatacatttgcggagatagatttgggggaggca
ttgaatcaaaatattcagaggtgtaagtatgtgaaaccgactcctgttcagcgtcatgca
attccaatatcacttggtggccgtgatttgatggcttgtgcccagacgggatcagggaag
actgccgctttctgttttccaattataagtggaataatgcgggggcagtttctgcagaga
cctcgtggagcacggattgtgtgcccgcttgcccttattctctcccctacaagagagctc
tcatgtcagatacatgatgaagcaaaaaagttttcctatcaaactggcgtcaaggtggta
gttgtttatggaggggcgccaatcaaccagcagttgcgagagcttgaaagaggagtcgac
attcttgtagcaactcctggacgattggtggatttgcttgagcgggctagagtgtcattg
cagatgatcagatatttggctcttgatgaggcagatcggatgctggatatgggttttgag
cctcaaattagaaagatagtggaacaaatggacatgcctccacctggtacgagacagaca
atgctattcagtgcgacatttccaaaggagatacagagacttgcatctgattttctttca
aagtacatattcttggctgtcggaagagttggttcgagcactgacttaattgttcagaga
gttgaatttgttcatgagtctgacaaaagaagccatctgatggaccttcttcatgcacag
aaggaaaatggatctcacggcaagcaatttttgacattggtttttgtggagacaaaaaag
ggagctgactcattggaacagtggttgtgcatgaatgggtttcctgcaacaactattcat
ggtgatagaacacagcaggaaagagaaatggcattacgctcatttaagagtggaaggaca
ccaattttggtagccacagatgttgcagcacgtggtcttgatatcccccatgtagctcat
gttgttaactttgatctccccaacgatatcgatgattatgttcaccggataggacgaaca
gggcgagctggaaaatcgggattggccacagccttcttcaacgacagtaatttgtcattg
gcaaggccactggctgatctaatgcaagaagcaaaccaggaggtacccgaatggcttact
cgttatgcatctcgggcctcatatggtggtggtaagaatcgaaggtctggtgcaggccgt
tttggtggccgtgactttaggagggagggctctttcaatcgggggacagatcactatggc
ggagggaacaatggtggtggatatggagttcctggtggttatggtggtgggggttatgct
tcaggtgtgaccagtgcttgggattag
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