Tripterygium wilfordii (thunder duke vine): 119995278
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Entry
119995278 CDS
T07256
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119995278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119995278
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119995278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_Aladin
PRP4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Vps41
WD_LRWD1
Tricorn_2nd
eIF2A
Beta-prop_SPT8
WD40_like
Nbas_N
T7SS_signal
Motif
Other DBs
NCBI-GeneID:
119995278
NCBI-ProteinID:
XP_038697663
LinkDB
All DBs
Position
3:9177266..9181267
Genome browser
AA seq
577 aa
AA seq
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MAAEEENPASTPPAEPSVSVPDGPPGVSGLSTISVTPDPPIQPISAPVIPVQPLPTIAPI
PTVPIAPVGRPLAPLPMRPPVLRPPVPQNGEVGASDSDSDHDDSRTATGSTEYEISEESR
LVRERQQQAMRELMTKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRERLRTIM
AKLDSEGQLEKLMKAHEEEAAAVSAATEDFEEEMVQYPFYTEGSKELLDARIDIAKYSIL
RAASRLERARRKRDDPDEDVNAEIDWALKQAKSLVLECSEIGDDRPLTGCSISRDGKMLA
TCAWSGVAKLWSMPQLNKVSALKGHTERATDVAFSPVHDHLATASADRTVKLWNTDGSLL
KTFEGHLDRIGRIAFHPSGKYLGSTSFDKTWRLWDIDTGVELLLQEGHSRSVYGITFHPD
GSLAASCGLDSLARVWDLRTGRSILVLEGHVQPVLGVSFSPNGYYLATGGEDNTCRVWDL
RKKKSLYIIPAHSKLISQVKFEPQEGYFLVTSSSDMTSKVWSGRDFKPVKTLSGHEAKVN
SLDISADAQHIVTVSHDRTIKLWRGSSNGGEDRMDMD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgaggaggaaaaccctgcatccactccaccagcagagccttctgtttccgtc
cctgatggtccacctggggtttcgggtctttcgaccatcagtgtcaccccggatccacca
atacaacctatcagtgccccagtaattcccgttcaacctttgcctactattgctccaatt
cctacagttcctattgccccagttggccggccgttagccccacttccgatgcgtccacct
gtcttaaggccgcctgtgccgcaaaatggcgaggtcggagctagtgactctgattctgac
catgatgactcccgaactgctactggttctacagagtatgagatttcagaagagagtaga
ctggtgagggagcggcagcaacaggctatgcgggagctgatgacgaagcgtcgtgctgct
gctctcgcagtgcctactaatgacatggctgtccgtgctcgtcttcgtcggcttggtgaa
cccataacgctttttggagagcgagagatggaaaggcgggagaggttgcggacgattatg
gcaaagctggattctgaagggcagttggagaagctgatgaaagctcatgaggaggaggca
gcagctgtttcagctgcaactgaagattttgaggaagaaatggttcagtaccctttctat
actgaaggatcaaaggagctattggatgctagaattgatattgcaaaatactcaatttta
agagcagcatcgcgtcttgaacgtgctcgtaggaaaagggatgatccggatgaagatgtg
aatgcagagattgattgggctctaaagcaagccaaaagtttggttctcgagtgcagtgag
attggggatgataggcctcttactggttgttccatctcacgtgacgggaaaatgctggca
acctgtgcatggagcggagttgctaaactgtggagcatgcctcaattaaataaggtttct
gccttaaaggggcacacagaacgtgcaactgacgttgcattctctcctgtgcatgaccat
ctggcgactgcttcagctgaccgaactgtaaaattatggaatactgatggatccctcctt
aagacgtttgagggccatctggatcgtattggacgtattgcctttcatccttcagggaag
tatttgggctcaactagctttgacaagacttggagactgtgggacatagatactggagtg
gagctgcttcttcaagaaggtcatagtagaagcgtatatgggataacctttcaccctgat
ggatcattagcagcatcttgtggacttgattcccttgcacgtgtttgggaccttcgcact
gggagaagtatcctcgttctagaaggtcatgttcagccggttcttggtgtcagcttttca
cccaatggatattatttagctactggtggtgaagataatacttgtcgcgtgtgggatttg
aggaagaaaaaatctttgtatataatacctgcgcactcaaaacttatatcacaagtgaag
tttgaacctcaagagggttactttttagtcacttcttcaagtgatatgacatcaaaggtt
tggtctggtcgagatttcaagcccgtgaaaactttatctggtcatgaagcaaaagttaat
tctctggacataagtgcggacgcgcaacatattgtgaccgtctctcatgatcggaccatc
aaactttggcgtggcagtagcaatggtggggaagaccgtatggatatggactga
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