Tripterygium wilfordii (thunder duke vine): 119995349
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Entry
119995349 CDS
T07256
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119995349
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119995349
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
119995349
NCBI-ProteinID:
XP_038697751
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Position
3:8803393..8805902
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AA seq
460 aa
AA seq
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MASQHPILFLVFLLISMPFISCHNVLQEDNIIHHHEYYINGNIIDDFDDEVSGLYGGGSS
SQAAYPSYFSSIFDDQVSSFKRFDKLGCPLRACVDVDGFGAKGDGKTDDTQAFVKAWKAV
CSSKAAILVVPEKTYRLRPITFSGPCQSDVILQVYGTIEASDNRGDYTEDPRHWLVFDSV
ENLLVQGGGTINGNGNIWWQNSCKINKSLPCKDAPTALTFHKCKNLMVRSLKIQDAQQIH
VSFQGSINVQASNLFVTAPKESPNTDGIHVTETQNIQITSSVIGTGDDCISIANGSQNVL
AQDITCGPGHGISIGSLGSGSSEAYVSGVTVIGAKFSGTTNGVRIKTWQGGSGSASNIEF
KNISMYNVTNPIIIDQNYCAQHKPCKQQKSAVQIENVMYQNIKGTSASDVAINFDCSESF
PCQGIVLEDISLVRQGGKAAEAVCNNVNLAEFGVVSPQCP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaacatccaatattattccttgtctttttactgatttccatgcccttcatt
tcatgtcacaatgttttacaagaagacaatatcatccatcatcatgaatattacattaat
ggtaatataattgatgattttgatgacgaagtctctggcttatatggtggtggttcttct
tctcaagctgcttatccttcctattttagctccatttttgatgatcaagtttcaagcttt
aagaggtttgacaaactgggttgtcctctaagagcttgtgtcgatgttgatggctttgga
gctaagggtgatggaaaaactgatgatacccaggcatttgtgaaggcgtggaaagcagtt
tgttcatcaaaagcagctattcttgtggtgcccgagaagacatataggcttaggcccatc
acattctctggcccatgccaatctgatgttatacttcaggtatatgggaccatagaagct
tctgataacagaggagactatacggaagacccaagacactggcttgtgtttgatagtgtt
gagaatttacttgttcaaggtggtggaacaatcaatggcaatggcaatatatggtggcaa
aattcctgcaaaatcaacaaatctcttccttgcaaggatgctccgacggctctcacattc
cacaaatgcaagaacttgatggtgaggagcctgaaaatccaggatgctcaacaaatccat
gtctctttccaaggtagcatcaatgtccaagcttcaaatctttttgtaactgcacctaaa
gaaagccccaatactgatggaatccatgtcactgagacccagaacatccagatcacaagc
tctgtcataggaacaggtgatgattgtatatccattgctaatgggtcccaaaatgtgtta
gctcaggacatcacctgtggaccaggtcatggaatcagcattggaagcttagggtctggg
agttcagaagcgtatgtttcaggcgtaacagtgattggagctaagttttctggcaccacc
aatggagtcaggatcaagacatggcagggaggctctggaagtgcaagcaacatcgagttt
aaaaacatttcaatgtacaatgtcaccaacccaatcataattgaccaaaactactgtgcc
caacacaaaccttgcaaacaacagaaatcagcagtacaaattgagaatgtgatgtaccag
aacattaaagggactagtgcttctgatgtggcaatcaattttgactgcagcgagagcttt
ccatgtcaagggattgtgttggaagatataagcttagtaaggcaaggagggaaagcagca
gaagctgtatgcaacaatgttaacttggctgaatttggagtggtgtccccacaatgccct
tga
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