Tripterygium wilfordii (thunder duke vine): 119995704
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Entry
119995704 CDS
T07256
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
twl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119995704
03460 Fanconi anemia pathway
119995704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119995704
03036 Chromosome and associated proteins [BR:
twl03036
]
119995704
03400 DNA repair and recombination proteins [BR:
twl03400
]
119995704
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119995704
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
119995704
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
119995704
FA (Fanconi anemia) pathway
Downstream FA components
119995704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
119995704
NCBI-ProteinID:
XP_038698141
LinkDB
All DBs
Position
3:12739536..12746313
Genome browser
AA seq
1124 aa
AA seq
DB search
MSTWQIFSDAGKNYRWEPTGRVVPSKPQDDQNGAQVQPHDSSCRFPSMVDLLLQGCSKLL
EDADEGNAGNSPIFRSGLGKSVVLKQSSIAKALSVLRDDDNDFGAINKGAEDAGENLCDL
PNSLFHTGSGRTVNISSAGLFRAKKLLGLEEGDLQDKYEGFEHVRTPSINNKPYGWQNFL
HLETSKDTNTIWIDSKSVSGASLNSTAGFMRRLSENEFDVNFMQSNTNDKSTKPPPIKFQ
TAGGRSLSVSNDALQRARSLLGDLEVGILSNEGDPNDPSLLFNERKTFDGTSSNKENEFC
TPFNLLGTARGKHIPGVFTSPLRSSSKQGRSLVDSRNVISRSNLIKKFDEADHSFCELDS
NASTVQQPLSNTNCAPNTPINDSRESCNGSKINQGGSLSGRPLVDISNRIDTAHTRSEKK
RFGNRSSISPFKRPRSSKFCTPLKKDALYVSNGLSTLSSENSCRKRVVSTKYPFQAPRKS
IKEYLGVPQLNQSMLEHLPEKVRWIKANNSSEYLFFDESGINCIGAEAFLHMLAQAGASM
QHVSKEWVANHYKWIVWKLACYERYCPDNSAVKFLSVSNVLEELKYRYEREVNYGHRSAI
KRILDGDALPSSMMVLCISAIYANNEHTIEAHPMALNVAENINVAKVELTDGWYSVDALL
DVPLSKQLAFRKLSVGQKLRLWGAGLCGWAGPVSPLEASKTANLSLHINGTYRAHWAARL
GFCKCVAAPLAFRCIKSNGGPVPCTLVGVTRIYPVLFKEKLSNGGSIVRSENMETKMVQL
NNQRRSTVVEGILSEFQRETQSSHINNNSDGEEGARIFKMLEAAAEPELLMAEMSSEKLS
LLASYQAKLEVTRQSDLEKSIKKALEDAGLGEREVTPFVRVRVVGVTSRTYQGKSSPKEG
LITIWNPTEKQLKDLVEGQAYVIAGLAPVHSESDVLYLQGRGSTTTWQLLSALGSQQFEP
FFNPRKSVLLSNLGEVPFSSEFDIAALIVHVGEVYMTANQKKQWVFVTDASISEILSEEI
LNSLLAICFCSPYVEEDSVAPINSNLVGTTVGFYNLIKRAKDQRNNLWVAEATENSTYSF
NFETPIHSHLKIAAASAQKWAKISHFIINKLKEKVISIIGDGNG
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtggcagatattctcagacgccggcaaaaattaccggtgggaaccgacgggt
cgggttgtcccttccaaaccccaagatgatcagaatggagctcaggttcaaccacacgat
tctagctgccgatttccttcgatggtcgatctattacttcaaggatgttcgaagcttcta
gaggacgctgacgaaggtaatgctggaaattctccgatttttagaagcgggttagggaaa
tctgttgtattaaagcaatcttcaatagcaaaagctttatctgttcttcgcgatgacgat
aatgattttggtgccatcaacaaaggggcagaggatgctggagaaaatctatgtgatttg
ccaaattcacttttccataccggatctgggagaacagttaatatatcatctgctggtcta
tttagagccaagaaattgttgggtttggaagagggagatcttcaggacaagtatgaaggc
tttgaacatgtgagaacgccatctatcaacaataaaccctatggttggcagaattttttg
catttagagacaagcaaagacacaaatactatatggattgactctaaatcagtttcaggg
gcttcactaaattctacagctggtttcatgagacgtttatcggagaatgagttcgatgtg
aatttcatgcaatctaacacaaatgataaatcaaccaaaccgcctccaatcaagttccag
actgcagggggaagatccttatctgtttcgaatgatgcattgcaacgggcaaggagtctt
ctgggtgatctagaagtagggattctctcaaacgagggggatccaaatgatcccagcctt
ctatttaatgaaaggaaaacatttgatggtacttcgtcaaacaaggaaaacgagttttgc
actccatttaatcttctgggaactgcaagaggcaaacatatccctggagtttttacctcc
cctcttcgatcatcttctaagcaaggaaggtcactagttgattccagaaatgtaatttcc
agaagtaacttgatcaagaaatttgatgaagctgaccatagcttttgtgaattggatagt
aatgcatctactgtacagcagcctttaagcaacacgaattgcgcacctaatacaccgata
aatgattctagggaaagttgtaatggttctaagattaatcaaggaggaagtttatcaggc
cgtccgttggttgatatttcaaatagaattgacactgctcatactagaagtgaaaagaag
agatttgggaacagaagttccatatctcctttcaagaggcctcgtagttccaaattctgc
actcctttgaaaaaggatgccctctatgtttcaaatggcttatctaccttatcgtctgaa
aattcttgtcgaaaaagagtggtttctactaaatatccatttcaggctccaagaaagtct
atcaaagaatatctgggggtgcctcagttaaatcagagtatgttggagcacttgccagag
aaagtaagatggatcaaagcaaataattccagtgagtacttgttctttgatgaatctggg
ataaattgtattggagctgaagcttttctccacatgctggcccaggctggagcttccatg
caacatgtttctaaagagtgggttgcgaatcactacaaatggatagtctggaaacttgca
tgttatgagagatactgtccagataattcagctgtaaaatttttgagtgtctccaatgtt
cttgaggagttgaagtatagatatgaaagagaagtaaattacgggcatcgctctgcaatt
aagagaattttggatggggatgcattgccttcatcaatgatggtgctatgcatttcagct
atttatgcaaataatgagcatacaattgaggctcatccgatggcattaaatgtggctgaa
aacattaatgttgcaaaagtggaactaactgatggatggtattcggtagatgctcttttg
gacgtgcccctgtcaaagcagcttgcctttagaaaactctctgtggggcagaaacttcgg
ctttggggagcaggattatgtggctgggctgggcctgtttcacctctcgaggcatcaaag
acggctaatttatcattgcatataaatgggacatatagagctcattgggctgctcggttg
ggattttgtaagtgtgttgctgctcctctggcttttaggtgcatcaagagtaatgggggt
cctgtcccttgcactttagttggagtcacacgaatatacccagttctcttcaaggagaag
ttaagcaatggtggatctattgttaggtcagagaacatggagactaagatggtgcaactg
aacaatcagaggcgctctactgtcgtggaaggcattctttctgagtttcaaagagagact
caaagttctcatatcaataacaatagtgatggcgaagaaggagcaagaatttttaaaatg
ctcgaggcagcggctgaaccagaacttttaatggcagagatgagctcagaaaaacttagt
ttgcttgcctcttatcaagcaaagttagaggtgaccagacaatcggaccttgagaaatca
atcaagaaagccttggaagatgctggcttaggtgagagagaggtaaccccatttgtgagg
gttagggttgtaggagtaactagtagaacatatcagggaaagagcagccctaaggagggc
ttaataacaatctggaatccgacagagaagcagctaaaggatctggttgaggggcaggca
tatgttattgcaggacttgctcctgtgcactctgaatctgatgtactctatctgcaagga
aggggatctactacaacatggcagcttttatctgctttgggatctcagcaatttgagcct
ttcttcaatcctcgcaaatcagtgttgctgtcaaatttgggtgaagttcctttttccagt
gaatttgatattgctgcactaattgtgcatgtcggtgaggtttatatgaccgccaatcag
aagaaacagtgggtatttgtgaccgatgcttcaatttctgagatactatcagaagaaata
ttgaattctttactagccatttgcttctgctcaccatacgtagaagaggattcagttgcc
cccattaactctaaccttgtgggaaccacagttggtttctacaatctcatcaagagggct
aaagaccagagaaataatctttgggtagctgaagcaacagagaattcaacttattctttc
aattttgagacgccaattcacagtcacctcaaaattgctgctgcctctgctcagaaatgg
gctaagatctcccactttattattaataagcttaaggagaaggttatatctattattggc
gacggtaatggttag
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