Tripterygium wilfordii (thunder duke vine): 119995806
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Entry
119995806 CDS
T07256
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
twl03000
]
119995806
03036 Chromosome and associated proteins [BR:
twl03036
]
119995806
Transcription factors [BR:
twl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
119995806
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
119995806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
HMG_WDHD1
HMG_box_5
YL1
Motif
Other DBs
NCBI-GeneID:
119995806
NCBI-ProteinID:
XP_038698178
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All DBs
Position
4:6261116..6268224
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AA seq
640 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNPGQLKIYSGGILWKKQGGGKSVDVDKDDIVSVTWMKVPRTN
QLGIRIKDGLYYKFTGFRDQDVTSLTNFFQNTCGMTPEEKQLSVSGRNWGEVDLNGNMLT
FMVSQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMELSFHIPNSNTQFV
GDENRPPAQVFREKIMSMADVGAGGEEAVTTFEGIAILTPRGRYTVELHLSFLRLQGQAN
DFKIQYSSVIRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDTVVQSTLSIN
EDILSTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKNFFFLPKPPTLILYEEIDYVEFERHAAGGSNMHYFDLLVRLKTEQEHLFRNIQ
RNEYHNLFDFIRLKGLKILGIGSELMTEGVAAVLQNEDDDAVDPHLERIRNEAGEDESDE
EDEDFVAGKDDEGSPTDDSGEDESDASEGADVKEKPAKRESKREPKASSSKKKSKDVDDD
GSKRKKQKKKKDKNAPKRSLSAYNFFTRVETEKIKKVTPGLGFTEISKINAEKWKRMSAE
EKEPYEGKAREDKKRYRDEISGYKNPQPMDIDSGNESDSS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggtcacctcttcaataacatctctctcggcggccgaggaggcacgaatccc
ggacagctcaaaatatattcaggtgggattttgtggaagaaacaaggcggtggtaaatct
gtggatgttgataaagacgatattgtgagtgtcacgtggatgaaagtcccaaggacaaat
caacttggtattcgaatcaaagatgggttgtactacaagttcacaggattccgtgaccag
gatgtaaccagtttgactaattttttccaaaacacgtgtggaatgacacctgaagagaag
cagctttctgtcagtggccgtaactggggagaggtcgatttaaatgggaatatgctcaca
tttatggttagtcagaagcaagcatttgaagtatctttggcagatgtatcgcaaacacaa
cttcaggggaaaaatgatgttatcttggagttccacgtagatgatacaacaggagctaat
gagaaagattctttgatggaattaagttttcatattcctaactccaacactcagtttgtt
ggtgatgaaaaccgcccccctgctcaagttttccgtgaaaaaattatgtcgatggcggat
gttggtgctggaggcgaagaagccgtaacaacatttgagggtattgcaatacttactcca
aggggtcggtatactgttgaacttcatctctcattcttgcgcctccaagggcaggcaaat
gatttcaaaattcagtacagtagtgtgattcggctgtttttgcttccaaagtcaaatcaa
ccacatacttttgttgttgttactcttgatccaccgatccgtaaaggccaaactttgtat
ccacacatcgtattgcagtttgaaacagacacagtggttcaaagcaccctgtcgataaat
gaagatatattaagtaccaagtacaaggacaagttagaaccttcttataaggggcttatt
catgaagtgttcaccacaatactacgtggcttgtctggtgctaaagtaactaaaccagga
aaattccgtagctgccaagatggttatgccgttaagtcttcgttgaaagctgaagacggt
gtcctgtatccacttgagaaaaatttcttctttttacccaagccgccaactcttattctt
tacgaggagattgattatgtggaattcgagagacacgccgcgggaggctcaaatatgcat
tattttgatcttctcgttagactaaaaactgagcaagagcatctgtttcggaacatccaa
aggaatgaataccacaatctatttgacttcatccggttgaagggtttgaaaattctggga
ataggtagtgagcttatgacagaaggagtggctgctgttcttcagaatgaagatgatgat
gctgttgaccctcatctcgagcgtattaggaatgaggctggtgaagatgaaagtgatgaa
gaggatgaagattttgttgctggtaaggatgacgaaggctcaccgactgatgattctgga
gaggacgaatctgatgccagtgagggtgctgatgtaaaagagaagcctgccaaaagagaa
tccaaaagggagcctaaggcatcttcatcaaagaagaagtctaaagacgtagatgatgat
ggttcaaagaggaaaaaacagaaaaagaagaaggataaaaatgcacctaaaaggtctttg
tctgcttacaatttctttacaagggtagagacagagaaaataaagaaagttacccctgga
cttggattcacggagatcagtaaaataaatgcagaaaagtggaaaagaatgtcagcggag
gaaaaggaaccttatgaaggaaaggctcgtgaagataaaaaacgttacagagatgaaatc
agtggctacaagaatccacaaccaatggacatcgactcagggaatgaatctgatagtagt
tag
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