Tripterygium wilfordii (thunder duke vine): 119996097
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Entry
119996097 CDS
T07256
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119996097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119996097
03036 Chromosome and associated proteins [BR:
twl03036
]
119996097
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119996097
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119996097
PBAF complex
119996097
GBAF(ncBAF) complex
119996097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
119996097
NCBI-ProteinID:
XP_038698543
LinkDB
All DBs
Position
4:6506573..6513349
Genome browser
AA seq
796 aa
AA seq
DB search
MPGSPSDGRGKWKRRKREPQIARKPKHEEAEDEDDDESLDREDSEEPNQNLLSAAVAADP
GSQEVEVLAEGGVRICDFPVVVRHTVNRPHSSVMAVVAVERANLVGDSVIRGQVTMELEN
VSYGQLQAVSRVPAESGAAATTGGNDQDRSDGGNLTPPYVITPPPIFEGSGVTKRFQSRV
HVVPMHSDWFSPASVHRLERQVVPLFFSGKSPNHTPEKYMECRNFIVAKYMENPEKMLTI
SDCQGYVVGVDNTNLSRIFRFLDHWGIINYCAAAPTREPLNGGSYLREDPGGDIHVPSDA
LKSIESLIKFDPPKCRLRATDVYSSTSCHVDDFSDLDDRIREHFSDNHCNSCSQPLPSIY
YQSHKEADVFLCSDCFHGGKFVIGHSSIDFVRTDSTKDYGDIDGESWSDQETLLLLEAVE
IYSENWNEIAEHVGTKSKSQCILHFLRLPMEDGKLENIEVPSTSKSSNVSNRDDRGSLHS
NSNGSYLNDGDSERRLPFANSGNPVMSLVAFLASAIGPRVAAACAHASLAALSEDNSTAT
SGNIVQMGGSGHDSRMNLEGIHGREGSFHRDLGNSIQQKEASSAVHGSQGQNEAQFTSIS
AEKVEAAAKAGLAAAAVKAKLFADHEEREIQRLYANVVNQQLKRLELKLKQFAEVETLLV
RELELVEKTRLRFSGERAHILATRFGGAAANSQINMPGVAPSIVNNNIGSHRPQVASASF
SQPSISGYGNNQLVRPQMPFMPSPSMFPLGPRLPITSAQTSSSTPSNVMFSSQGNPQPSI
NHPSLRSVSGTSSALG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaggttcaccttcagatggtcgcggcaaatggaagagacggaagcgggagccccaa
atcgcccggaaacctaagcacgaagaggccgaagatgaggacgacgacgagtcccttgac
cgggaggactccgaggagccgaaccagaatctgttatccgctgctgtcgcggccgatccg
gggtcacaggaggtcgaggtgctggccgagggtggggttcgcatttgtgatttccctgtg
gtggtgcggcacacggtgaaccggcctcactcgtctgtgatggctgttgttgctgtggag
agggcgaatttggtaggggatagtgttatcagggggcaggtgacgatggagttagagaat
gtttcttacgggcagctccaggcggtgtctcgtgtgcctgctgaaagtggtgcagctgcc
acgacgggtgggaacgatcaggataggagtgatggtgggaatttgactccaccgtatgtg
atcacgcctcctcctatcttcgagggcagcggtgtaactaagcggtttcagagtagggtt
catgtagttcctatgcattcagattggttttcgccagcctcagtccatcggcttgagaga
caagtggtgccactttttttttctgggaagtcgccaaaccatacaccagagaagtacatg
gagtgtaggaacttcattgttgctaaatatatggaaaatccggagaagatgcttacaatt
tctgattgccagggttatgtagttggtgttgacaatacaaatttaagtagaatttttcga
tttcttgatcactggggaattatcaattactgcgcagctgcaccaactcgtgagcctttg
aatggtggttcctatttgagggaggatccagggggtgatattcacgtgccatcagatgct
ttaaagtcaattgagagtttgatcaaatttgaccctccaaaatgtaggctcagggcaact
gatgtttattcatccacgtcttgtcatgttgatgatttctctgacttggacgacagaata
cgagagcacttttcagataatcattgcaattcttgttcacaacctcttcccagcatttac
tatcaatcacataaggaggccgacgtatttctgtgttctgattgctttcatggggggaaa
ttcgttattggtcactcgagcatagattttgtgaggacggattcaacaaaagattatggt
gatatagatggggaaagttggagtgatcaggagacactgctgctactcgaggccgtggaa
atttacagtgagaattggaatgagattgctgagcatgttggcaccaagtcaaaatcacaa
tgcatccttcatttcctccgcctacctatggaggatggaaagttggaaaacattgaagtt
ccaagcacgtctaagtcttccaatgtgtcaaatagagatgatcgtggaagcttgcattca
aactcaaatggatcataccttaatgatggtgactctgaaagaaggctgccttttgcaaat
tctgggaatccagtaatgtccctggttgcctttttggcctctgctattggacctagagtt
gctgcagcctgtgcccatgcatcgttggctgcattgtcggaggataatagcactgccact
tctgggaacattgtgcagatgggaggatcagggcatgatagtaggatgaatttggagggt
attcatggtagagaaggcagtttccacagagatttgggaaattcaattcagcaaaaagaa
gcgagctctgcagtacatggttctcagggccaaaatgaggcacagttcacttctatatct
gcagagaaagttgaagctgctgccaaagctggtcttgctgctgcagcagtcaaggcaaaa
ctctttgcagatcatgaagaacgagaaatccagaggctgtatgccaatgttgttaatcag
cagttaaagagattggagctgaagttgaagcaatttgctgaagtggaaaccctgttagta
agagaattggaactagtggagaagacaagactaaggttttctggtgaacgggcccacatt
ttagcaactcgttttggaggtgctgcggccaattcacaaataaatatgccaggtgtcgct
ccttccattgttaacaacaatattggcagccataggccacaagttgcgtcagcatctttc
tcgcagccaagcatttcaggctatgggaacaaccaattagtccgtccacaaatgccattt
atgccatccccgtcgatgtttccgctagggccgaggcttcctataacatccgcacagaca
tcctcatcaactccttcaaatgttatgttcagttcccaaggaaatcctcagccttccatc
aatcatccatctctgaggtctgtatcagggactagctctgctcttggctga
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integrated database retrieval system
