Tripterygium wilfordii (thunder duke vine): 119996522
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Entry
119996522 CDS
T07256
Name
(RefSeq) uncharacterized protein LOC119996522
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119996522
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119996522
Surveillance factors
Other surveillance factors
119996522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
119996522
NCBI-ProteinID:
XP_038699119
LinkDB
All DBs
Position
4:4151085..4158730
Genome browser
AA seq
1665 aa
AA seq
DB search
MADGNLNLPDDLISTNSPDERFSVKGEAWEGNGEDKAMGLLDESKDQVTSESSIPLSPQW
LYAKPVDYKMLASGTTGDTRSPNALSHGNLADSNLKDNWHLDGSQEKKDWRRASTEVDSS
RRWREEERETGPLGRNRKKDDHRVDSMSARDNSENRVMSSDRWHDIANRNSGHESRRDSK
WSSRWGPEEKEKDIRTDKRTDAEKEDTHSDRQSFVSNSRLASERENESRDKWRPRHRMEV
NAVGSAAYRTASAFGLERGRVEGSSMRFAPGRGRATGNGSVQIGRPPCAPAIGSLLSVNN
GKYCYPRGKLLDIYRNQKSATNFHAIPEGMEHLSPPTQVDVVKPLAFVVPDIEEESVLGE
IWFGRITSSGVFRESLRDKYNISNDNITGINDVRLAEENQISMTDADETLDFSDKAGVNR
SCKGDVDASHVSGTRIVMSEERDAFNEEQKILAAVSVAPNDVSNNARESGPGNSVHELKV
SGKEKDADMDFSANSKLADIDAPTSFEIGSQLPNDSNSLFDFSTLHQNRSDDPLHVRSSD
EAHSLESGIPPEELSLYYLDPQGNVQGPYLGIDIITWFEQGYFGIDLLVCLSDGPEQLCF
QELGEVMPHLKVKSGSASNADLATRRTLSDVVGGNLEGSALHPASASDFKGLDYPENQHW
SSSGCDVMSSVSGQSRVPDHSYRTDVHYDQSFKNFVAQDEEIVFPGSSTGIPLMGPDNRH
GSVSNLAGHPSLGTKFSETSLPQHQDDMLHPFGLPLSELRINSHLMGCQSSNIVTGVGEQ
GHRRDSFFEKDTGFTSHRSFGAMADQIPLVGTRSSNYRNKPFSGPNINSGPIDAQHFSHG
EQECNDFDFAKHLMIQKLQKEQLQPHDLLSSHPFAQTSGLEADQIPGFTPQSKLPNVQSL
VHNQFPNMDRLLELEHQQQRQLELQQQRRQFELQQQRQQFELQQQRQFELQQQQRLMLMQ
QQQRQSHEQLRHNQIKLLQQQQQQQQSQVQQLLFEQMLQNQMSDFVDGQPNVDPVKDNFL
DQPQLRMLLLRELEQNSHTSRHFDPSLEQILQADISQNALREQEAHYLDLLSQVKHGDMH
PSEHEIRLRQQQLQAQHLSMALRQQLGMEGGRHVGGPWSVDETGQFQGDPAGSHHSFSAG
INTLDFYPQRQRRPSHEEQLGHLNIQKHHQRGFYEPNPQAFERSISLPNVNSGMKLDNAN
ASAQGLDLEHLYMHSADQLSSFSSGASAVGRQVLDDFRGSHPQAMAMHLSGNNRQLDNSS
IEGRMQQLHLEAERQRKFPDGTIISPDLDMWGLAGTHEENSKQALMDLHQKLGVQSMQSS
EVDPEHALLSSDAREILKPISESFSSSVPFNRFPGKEASMNNSYVEGLQNSFSRVSLQDR
LVFEAMNRQFNHQGNSEEFPIRSNSAALLEESFLSGDSDMTGRDIVEREGKGKRNGSQGI
TAMNRSFSERGDDLVAVADGAMDFRELPINAHSRHSSISSAGGNGSLYSYDMGLDKSVEE
EVFNDRQSSILSKGLASHGRPPVSRALSSQDVSSEPASSSLIKLKNSNNIATSDDVNRES
TGNSAAVKNARTQASGNREVRFQRTSSCSDAVVSETSFIDMLKKPVPSEADPLNAAAMDS
SDGGAVAGKSGKRKGKKGRQIDPALLGFKVSSNRILMGEIQRLDD
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaaatctcaatcttccggacgatctcatctccaccaactctcctgatgaa
cgcttttccgttaaaggtgaagcctgggaaggaaatggtgaggacaaggctatgggtttg
cttgatgagtccaaagatcaagtgacttcagagagcagcatacctctttctccacaatgg
ctttatgctaagccagtcgattataagatgttagctagtggaacaactggggacacacgt
tcaccaaatgctttgtcacatggaaaccttgccgactccaatttgaaagacaactggcat
ttagatggatctcaggaaaagaaagactggcggagggcttccacagaggtcgacagcagt
cgtcgctggcgtgaggaagagagagaaacgggcccgcttggtagaaatcgcaaaaaagat
gatcaccgtgttgattccatgtcagctagggataactctgagaacagagtcatgtcttca
gatcgttggcatgacattgctaaccgcaattctggccatgaatcccggcgagacagcaag
tggtcatcaaggtggggcccagaagaaaaagagaaggatattcgaactgataagaggaca
gatgcggaaaaggaagatactcacagtgacagacaatcttttgtcagcaacagccggtta
gcttctgaacgtgagaatgaatctcgtgacaagtggaggcctcgccatcgcatggaagtt
aatgcggttggctctgctgcttatcgtactgcatcagcttttggcttggagagaggacga
gtggagggctctagcatgcgttttgctcctggaagaggaagagctactggtaatggaagc
gtgcaaattggcaggcctccctgtgctcctgctattgggtctcttctttcggttaataat
ggcaagtactgctatccaaggggaaaacttctagatatatatcgtaatcagaagtctgct
acaaattttcatgctatacctgaagggatggagcatttatctccaccaacccaagtagac
gttgttaagccattggcttttgttgttcccgatatagaagaagagtctgtccttggagag
atatggttcggaagaattacaagcagtggggtttttcgggaatcgctcagggacaagtat
aacatatcaaatgataatattacaggcattaatgatgttagattagctgaggagaatcag
atttccatgactgatgctgatgaaactctagatttttcagacaaggccggtgtaaatagg
tcctgcaaaggtgatgttgatgcatctcatgtgtctggtactcggattgttatgtctgaa
gagagggatgcatttaatgaagaacagaaaatcttggcagcagttagtgtggctccaaat
gatgtctctaacaatgcaagagagagtgggcctggaaacagtgttcatgaactcaaggtc
tctggaaaagaaaaagatgcagatatggatttttcagctaactctaagttggcagatatt
gatgctcctacttcttttgaaattggtagccagcttcctaatgattcaaattctctattt
gacttttcaactctgcatcaaaatcggagtgatgacccactccatgtaaggagcagtgat
gaagcacattcattagaaagtgggatcccgccagaggagttaagtctgtactatcttgat
ccgcaaggcaatgtacagggaccatacttgggtattgacatcattacatggtttgagcaa
ggctattttggaattgacctactagtctgtttgtctgatggccctgagcaattgtgtttt
caagaacttggtgaggtcatgccgcatttgaaagtcaaatctgggtctgcttccaatgct
gatttagcgactaggcgaactctgtctgatgttgtgggaggcaatttggagggaagtgca
ctgcatcctgcttctgcttctgactttaaggggttggattatccagaaaaccagcattgg
tcttcatctggatgtgatgtgatgtcaagtgttagtggtcagtctcgagtacctgaccac
agttatcgcactgatgtccattatgatcaaagcttcaaaaattttgttgctcaagatgaa
gagattgtttttcctggaagtagtactggtattcccttgatgggacccgataacaggcat
ggttcagtttccaatctcgctggtcacccttcccttgggactaaattttcggaaactagc
ttgcctcaacatcaggatgatatgttgcatccatttggtctgccattgtctgaactcagg
atcaattctcatttgatgggttgtcagtcatcaaatatcgttactggtgtgggtgaacag
ggtcacaggagagattctttctttgagaaagacactggttttactagtcacaggtctttt
ggtgcgatggctgaccaaattccacttgtagggacgcggtctagtaattataggaacaaa
ccattttctggcccaaacataaattctgggccaatagatgcccaacacttttctcacggg
gaacaagagtgcaacgattttgactttgcaaagcacttgatgattcagaaattgcagaag
gaacaacttcagccacatgatcttttatcttctcatccttttgcacaaacgtctgggttg
gaggcagatcagattccaggttttactcctcagagcaagcttcctaatgttcagtctctg
gtccataatcaatttccaaatatggaccggcttttggaacttgagcatcaacagcagcgg
caacttgagcttcaacagcagcggcggcaatttgagcttcagcaacagcggcagcaattt
gagcttcagcagcagcggcaatttgagcttcaacaacagcagaggctaatgctgatgcag
cagcaacagcgacaatcacatgagcaactccgtcacaaccaaataaaattactgcagcaa
caacaacagcaacagcagtctcaagttcagcaattgctttttgaacaaatgctgcagaat
cagatgtctgattttgttgatgggcagccaaatgtggaccctgtgaaagataactttcta
gatcagcctcagttgaggatgctactcctgcgtgaactggaacagaattctcatacttca
aggcattttgatccatcattggagcagatactccaagcagacattagtcaaaatgcactt
cgggaacaggaggctcattatttggacctcctatcacaagtgaagcatggtgacatgcat
ccctcagaacatgaaattcgtttacggcagcaacagttgcaggcccagcatttatctatg
gcactgaggcagcaattgggaatggaggggggaaggcatgttggtgggccatggtcggtt
gacgaaactggtcagtttcagggggatcctgctggtagtcatcattctttttctgcagga
atcaatactttggatttttatccgcaacggcagaggcgtccttctcatgaagagcaattg
ggccaccttaacatacaaaagcatcatcagcgtgggttttatgagcctaaccctcaagcg
tttgagaggtcaatttctcttcccaatgttaattcagggatgaagttggacaatgcaaat
gcatctgcccaaggtctagatttagaacatttatatatgcactctgctgaccagttgagt
tctttctcttctggtgcatcagctgttggtcgacaagttcttgatgactttcgtggttct
catccgcaagctatggcgatgcacctctctggaaataataggcaactagacaatagctcg
attgaaggaaggatgcaacaattgcatcttgaagctgagaggcaaagaaaatttccagac
ggtaccataatttctcctgatttagatatgtgggggttggctggaactcacgaggaaaat
tccaagcaagctttgatggaccttcaccagaaattgggtgttcagtctatgcaatcatcg
gaagttgatcctgaacacgctttattatcttctgatgccagggaaatccttaagccaatt
tctgagtcattttcatcaagtgtaccttttaatcgtttcccaggtaaagaagctagcatg
aataactcatatgtagaagggcttcagaattctttctcccgtgtttctttgcaagatcgt
ttggtctttgaggcaatgaatagacaatttaaccatcagggaaacagtgaagagtttcct
atcagatcgaattctgcagcattattagaagagtcgttcttgtcaggtgatagtgatatg
actgggagagacatcgtagagcgagagggaaaggggaagaggaatggttctcaaggcata
actgcaatgaacaggtcattttcggagagaggagacgacttggtggcagtagcggatggt
gccatggattttcgagagttacctattaatgcccatagcaggcatagttcaataagtagt
gctggtggaaatggaagcttgtacagctatgatatgggattggataaatcagttgaagag
gaagttttcaatgacagacagtcgtcaattttgagcaaggggcttgcttcacatggacgc
cctcctgtatctcgggctctgtcttcacaagacgtttcatcagagccggcttcttcctca
ctgattaagctgaaaaattcgaacaatattgcaacttcagatgatgtgaatcgtgagtct
actgggaattcggcagctgtcaaaaatgctcgaacacaggcatctggcaatagagaggtt
cgtttccagaggacttcatcttgcagtgatgctgttgtatcagagacatcattcattgat
atgcttaagaaaccagttccttcagaggccgatccattaaatgctgctgcgatggattct
tccgatggaggtgcagttgcaggtaagagtggcaaaaggaaagggaaaaaagggaggcaa
atagaccctgctctccttggcttcaaggtctccagcaaccggatcctgatgggtgaaatc
caacgccttgatgattaa
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