Tripterygium wilfordii (thunder duke vine): 119996585
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Entry
119996585 CDS
T07256
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03030
DNA replication
twl03420
Nucleotide excision repair
twl03430
Mismatch repair
twl03440
Homologous recombination
twl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119996585
03420 Nucleotide excision repair
119996585
03430 Mismatch repair
119996585
03440 Homologous recombination
119996585
03460 Fanconi anemia pathway
119996585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
twl03000
]
119996585
03032 DNA replication proteins [BR:
twl03032
]
119996585
03400 DNA repair and recombination proteins [BR:
twl03400
]
119996585
Transcription factors [BR:
twl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119996585
DNA replication proteins [BR:
twl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119996585
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119996585
MMR (mismatch excision repair)
119996585
DSBR (double strand breaks repair)
HR (homologous recombination)
119996585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
119996585
NCBI-ProteinID:
XP_038699202
LinkDB
All DBs
Position
4:2693458..2696558
Genome browser
AA seq
624 aa
AA seq
DB search
MAVNLTTNAIATITAGDVDSKPLVQVLDIKLIGNSQERYRLLLSDGVSSQHAMLATQLND
RVKTGRVKKGSVIQLIDYICSTVQNRKIIVVLNMETIMLDCELIGNCKVLPESDVSAQKA
LPNSNLQQSSRVNYGSMGAQMHSNNGQNFRPAVQPPYQPPPNYRNHGAIMKNEAPARIIP
IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNTVVDRF
YDVIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVELCPHEDGSIPQQQFSFKP
ISEIENAENNSILDIIGIVISVNPSVPILRKNGMETQRRIVNLKDASGRSVELTLWGDFC
NKEGQKLQEMVDSGFFPVLAVKAGKVSDFSGKSIGTISSTQLFINPDFPEAGGLRHWFDQ
VGRNVASLSISRDSVPGAPKNEIRKTVSQIKDEGLGRSDKPDWVTVRATITFIKTDTFCY
TACPLKIAEDRQCNKKVTKSGTGRWQCDRCNQEFEECDYRFLLQVQIQDHTGLTWVTAFQ
EAGEEIVGFSAKELYLLKFELQDDAKFADMIRSRLFYQYLFRLKIKEELFGDEQRVKITV
VKADKVDYTSESSYLLDLISKLHK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaatctgacgacgaacgctatagcgacgatcactgcaggcgatgttgactcg
aagccgctggtgcaggtcttggacatcaagctcatagggaactcgcaagagaggtaccgc
ttgcttctctccgacggtgtttcatctcagcacgcgatgctcgccactcagctcaatgac
cgtgtcaagaccggtcgagtcaagaagggctccgtcattcagttgatcgattacatctgc
agcaccgttcaaaatcgaaagattattgtggtactgaacatggaaactataatgcttgat
tgtgaattaattgggaattgcaaggtgctgcctgaatctgatgtaagtgctcagaaagca
ttgcctaacagcaatttgcagcagtcatcaagggttaattacggtagtatgggtgcccaa
atgcatagcaataatgggcagaatttcagacctgctgttcaacctccgtatcaaccacct
cctaactacaggaatcacggtgcaataatgaagaatgaggcacctgcccgtatcattcct
atagctgctcttaatccttatcagggaaggtgggctattaaggcaagggtaactgcaaaa
ggagatctccgtcgctacaacaatgcccggggagacgggaaggtgttctcgttcgaccta
cttgactctgacggtggtgagatacgggtgacctgctttaatactgttgttgaccgcttc
tatgatgttattgaggttggtagggtctatttgatttctaaaggcagcttaaaacccgca
cagaagaatttcaaccatttgaagaatgagtgggagatatttttggaggcaacttcgact
gtggagctttgccctcatgaagatggttctattccacaacaacagttctccttcaaacct
attagtgaaattgagaatgctgagaacaattcaatacttgacattattggtattgtgata
tctgtaaacccttcagttcctatcttgagaaagaatggtatggaaactcagagaagaatt
gttaaccttaaggatgcatctggtaggagcgttgagttaaccctttggggtgatttctgc
aataaggaaggtcaaaaactgcaagagatggtggattctggttttttcccggttctagct
gttaaagctggtaaggttagtgatttcagtggcaaatctattgggacaatttcttctact
cagctcttcataaatccagattttccggaggccggcggcctgagacactggtttgatcaa
gtgggaaggaatgttgcttctttgtccatttctagagacagtgtgcccggagcacctaag
aatgagatccgtaaaactgtttctcagatcaaggatgaaggtcttggaagatcagataaa
ccagactgggtgactgtgagagcaaccataacttttatcaaaacagatacattttgttat
acagcatgcccacttaaaattgcagaagatagacaatgtaacaagaaagtgacaaagtca
gggactggaagatggcaatgcgacagatgcaatcaagaatttgaggagtgtgattataga
tttcttctccaagttcaaattcaagaccatacaggattgacttgggtaacggctttccag
gaagctggggaggagatagtgggtttctcggcaaaggagttgtatttgttaaaatttgaa
ttacaggatgatgccaaatttgcagacatgatcaggagcagactcttttaccagtatctt
ttcaggctaaaaatcaaggaggaattgtttggtgatgaacagagggtgaagatcaccgtt
gttaaggcggacaaggtggattatacttcagagagcagctacctgcttgatttgatttca
aaattgcacaagtga
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