Tripterygium wilfordii (thunder duke vine): 119996661
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Entry
119996661 CDS
T07256
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
twl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119996661
04120 Ubiquitin mediated proteolysis
119996661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119996661
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119996661
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
U-box type E3
119996661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
119996661
NCBI-ProteinID:
XP_038699306
LinkDB
All DBs
Position
4:5855562..5863150
Genome browser
AA seq
1036 aa
AA seq
DB search
MASQRPQRSPEEVEDIILRKILLVSLTDSGETNDSRIVYLEMTAAEILSEGRELRLSRDL
MERILIDRLSGQFAGVEPPFDYLIGCYQRAHEESKKIVSMKDKDLRSEMESVIKQLKKLS
VSYCRIHLGNPELFSGGNLSSKRSASPLLPLIYAVVDGFGSGSGVQCPPWFLEEIFRDAD
FDTVDPILKGLYEDLRENVVKVTALGNFQQPLRALLFLVSFPAGAKSLVSHPWWIPKGVY
LNGRVIEMTSILGAFFHVSSLPDHTLFKSQPDVGQQCFSESSTRRPADLLSAFTTIKTVM
KNLHDGLAEVMLTLLKNTDTRENVLEYLAEVINKNSSRAHIQVDPISCASSGMFVNLSVI
MLRLCEPFLDANFTKKDKIDPKYVFDSSRLDLRGLTALHASSEEVAEWINRENPGRGDGS
NQSVEGVSRWLNSQEATSSGSSIGGVSAQNANPVSSSAQRTKYPFICECFFMTARVLNLG
LLKAFSDFKHLVQDISRSEDALSTLKAMQGQAPSPQLDLDIARLEKELEMYSQEKLCYEA
QILRDGILIQDALSFYRLMLVWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAIELLIFA
SRIPKALDGVLLDEFMNFIIMFMASPKFIRNPYLRAKMVEVLNCWMPRQSGSSATASLFE
GHQLSLEYLVRNLLNLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNSWRQIA
KQEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRL
FHSQENIIRIDMKLANEDVSVLAFTSEQITAPFLLPEMMERVASMLNYFLLQLVGPQRKA
LTLKDPEKYEFRPKQLLKQIVCIYVHLAKGDTENCFPAAISRDGRSYNDQLFSAAADVLR
RIGEDGRVIQAFIDLGAKAKLAASEAMDAEAALGEIPDEFLDPIQYTLMKDPVILPSSRI
TVDRPVIQRHLLSDSSDPFNRSHLTADMLIPHTELKAKIEEFVKFQASKRHSETSSIHSN
IKGTIQTTNGGDMLID
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcagagacctcaaaggtcacctgaggaggtggaggacataatcctccgcaaa
atcctccttgtatcgctcaccgatagcggggagacaaacgattctcgaatcgtctacttg
gagatgaccgcggctgagattctcagcgagggcagggaattgaggctctcgcgcgacctc
atggagcgtattcttatcgatcgactctccggccagtttgcaggcgttgagcccccattt
gattacttaatcggctgctaccaacgtgcgcacgaggagtcgaagaagatcgtgtcgatg
aaggacaaggatttgcgatcggagatggagagcgtgattaagcagctgaagaagctatct
gtttcgtattgtagaatccacttagggaatcccgagctgttctctggcggtaatctgagt
agtaagcgcagcgcttcgccgctcttgccgctgatttatgcggttgtggatgggtttggt
agtggtagtggggtccagtgtccgccttggtttttggaggagatctttagagatgcagat
ttcgatacagttgacccgatactgaagggactgtatgaggatttgagggaaaacgtggtt
aaagtcacggctttgggaaattttcagcagccattacgagcattgctattcttagttagc
tttcctgctggagcgaagtccctggtcagtcatccatggtggataccgaaaggggtttac
ttgaatggtcgtgtcatcgaaatgaccagcattttaggggccttttttcacgttagttcc
ctgcccgatcatacgttatttaagagccagccggatgttggccagcaatgcttctctgaa
tcatcaactcgtcgaccagctgacttgttatcagcatttaccacgatcaagactgtcatg
aagaacttacatgatggtttagcagaagtcatgcttacacttctcaaaaatactgatacc
cgtgagaatgttcttgagtatcttgcagaggtgatcaataagaactcatcgagggcccat
atacaggttgatcctatatcttgtgcaagttcaggcatgtttgtcaatctcagtgttatc
atgcttcggctctgtgagccattcttagatgcaaattttacaaaaaaagacaaaattgat
cctaagtatgtatttgacagtagccgtttggatttaaggggcctgactgctttacacgca
tcgtcagaagaagttgctgaatggattaatagagaaaatcctgggagaggtgatggctcc
aatcagtcagttgaaggtgtcagtcgctggctgaactctcaagaagccaccagttctgga
agcagcattggtggagtttctgcccaaaatgccaaccctgtatcaagtagtgcacagaga
actaaatacccatttatttgtgaatgcttctttatgactgcgagagtccttaacttgggc
ctgttgaaagcattttctgactttaagcatctagttcaggatatttcaagaagtgaagat
gctctgtccactttgaaggccatgcaagggcaagcaccttctccacaattggatttggat
attgctcgacttgagaaagagttggagatgtattcacaggaaaagctttgttatgaagct
cagatactgagagatggaatacttattcaggacgcactctctttctatcggctaatgttg
gtttggttggtgggcctggttggtggatttaaaatgcctctgccttctacttgcccaatg
gaatttgcatccatgcctgagcactttgtggaagatgcgatcgagctgcttatatttgct
tcccgaattcctaaagctttggatggagttttgctggatgaatttatgaacttcattatc
atgttcatggcaagtccaaaatttatcagaaacccttatctaagggcaaagatggttgaa
gtattgaattgctggatgccccgtcaaagtgggtcatctgctacagcttctctgtttgaa
ggccatcaattgtctcttgagtatcttgtgaggaatcttttgaatctttatgttgacatt
gagttcacgggttctcatacacagttctatgacaagtttaacatccgacataatattgcg
gagctgctagagtatctgtggcaggtccctagtcatcgtaattcttggagacagattgct
aagcaagaggaaaagggtgtctatttgaatttcctgaacttcctgatcaacgatagcata
tatctacttgatgagagtcttaacaagattcttgaacttaaagagctagaagctgaaatg
tcgaacactgcagaatgggagcgaagaccagctcaagagaggcaggagaggacccgtcta
tttcactctcaagaaaacattattcggattgacatgaagttagcaaatgaagatgtgagt
gtgctggcattcacatcagagcagattactgctcctttcctactacctgagatgatggag
agagtggccagcatgctcaattactttctgttacagcttgtgggtcctcaaagaaaagct
cttactttaaaagacccagaaaagtacgaattccgtccaaaacagctgcttaagcagatt
gtctgcatatatgttcatctggcaaagggtgatactgaaaattgcttcccagctgccata
tcgagagatggtcgttcttacaatgaccagttgttcagtgctgcggcagatgtccttagg
agaattggtgaagatgggagggttatacaagcatttattgacctaggtgcaaaagccaaa
cttgcagcttctgaggcaatggatgctgaagctgctcttggagagatacctgatgaattc
cttgatcctattcagtacacattgatgaaggatccagtgatcttaccttcttcaaggatc
actgtagaccggcctgtcattcaaaggcatcttcttagcgatagctctgatccgttcaac
cggtcacatcttaccgcggacatgctgattccacacactgagttgaaggctaaaattgag
gaattcgttaagttccaagcgtcgaaaaggcacagcgaaacctcatccattcatagtaat
attaaaggaacaattcaaaccacaaatggaggagacatgttaattgattag
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