Tripterygium wilfordii (thunder duke vine): 119996985
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Entry
119996985 CDS
T07256
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119996985
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119996985
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119996985
NCBI-ProteinID:
XP_038699689
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Position
4:complement(13545208..13547723)
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AA seq
392 aa
AA seq
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MAAYTYILVSFVLLFTYSHSPLLAFGASQYNVVTYGARPDGKTDSTPAFVASWVKACGSK
GPANIYVPKGRFFVRNVVFNGPCKNSAIVVQIDGTLVAPSDLNAANWVMFRDVNGVTVSG
GMMDGQGASLWACKASGKKSCRRGATSLEFENSNNIVIAGLTSLNSQLFHIVINDCHNVK
VQGVKVSAAGNSPNTDGVHVQGSTDVTILNSKIATGDDCVSVGPGTTNLWIENIACGPGH
GISIGSLGKDFQEAGVQNVTVTSVQFIGTENGVRIKSWGRPSNGFARNILFQHCTMTNVD
NPIVIDQNYCPDEKNCPGQASGVKISDVAYLDIHGSSATEVAVKLDCSKKYACSGIKMED
VKLTYKNQVAHASCVNADGSSSGIVEPSSCLL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatatacatatatacttgtctcatttgtgcttctctttacatactctcattca
cccttgttagcatttggggcttcacaatacaatgtggtcacgtatggagccagaccagat
ggcaagactgactccacaccggcctttgttgcttcatgggtcaaggcctgtggctccaaa
ggtccagccaacatttatgtccctaaaggaaggttctttgttcgcaatgtggtgttcaat
ggtccttgcaagaattctgccattgttgtccaaattgatggtacattggtggctccttct
gacttgaatgcggccaattgggtcatgtttagggatgtcaatggggttactgtatccggc
ggcatgatggacggccaaggtgcttccttgtgggcttgcaaggcttccgggaagaaaagt
tgccgcagaggcgctacgtcattggagttcgaaaattcaaacaacattgtgattgctgga
ttaacatccttaaatagccaactattccacattgtcatcaatgactgtcacaacgtgaaa
gtgcaaggagtgaaggtttctgccgccggaaatagtcccaacactgatggcgttcacgtt
caaggatcaactgacgttacaatattgaattccaaaattgctacaggcgacgattgtgtc
tcggtcggtccaggcaccaccaacctttggatcgagaacatcgcttgcggtcctggccat
ggcattagcattggaagtttggggaaagactttcaagaggcaggggttcagaatgtgaca
gtcacaagtgttcaatttattggtacagagaatggagtgagaatcaagtcatggggaaga
cccagcaatggttttgcaaggaacatattgttccaacattgcaccatgaccaatgttgac
aacccgatcgttatcgaccagaattactgccccgacgaaaagaattgtcccggacaggct
tctggggtgaaaataagcgatgtggcatacctagacatccatggctcatcagcgacggag
gttgcggttaaattggattgtagcaagaagtacgcatgtagtggtattaaaatggaagat
gtgaagcttacttacaagaaccaagtagctcatgcctcttgtgttaatgctgatggatcc
tcttctggtatagttgagccctcaagctgtttgctgtag
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