Tripterygium wilfordii (thunder duke vine): 119997181
Help
Entry
119997181 CDS
T07256
Name
(RefSeq) protein PAT1 homolog 1-like isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119997181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119997181
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119997181
mRNA degradation factors
5'-3' decay
Decapping complex
119997181
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
119997181
NCBI-ProteinID:
XP_038699964
LinkDB
All DBs
Position
4:5410844..5418301
Genome browser
AA seq
769 aa
AA seq
DB search
MERSDSKDLKDASGRPSDALFDATQYAFFGQDAMEEVDLGGLDDDGDDPVFGSVNDDDFS
LFDKDEGVGFGSLSDVDDLATTYAKLNSVVTEPKNPGVIGNRGSESFSRESSSATDWAQD
GELGSLLDQQMPCMEDAQELKRWPSQPQPSSARFSESKPLYRTSSYPQQPPQLHQYTSEP
ILVSKSNFTSFPLPGGRSQQASLQHPYISSLSDVSGSPFSAPNFSPLPNSNPHLAGLHHG
LDYGGNVPQYSSPELLFNSRGQNHWPNHSGLLHGDQSSLLQNILPPHLSRHDGVFSSQSH
LQQQQRLHASLQPSFSHLAGMQSQPYHSNPAPTHRMMFGLVQFRSKYMTTEEIESILRAQ
HAATHSSDPYIDDYYHQARLAQKSAGSRIKHHFSPSHLKELPSQGRNSAEQHPRAQADVL
GRIPLTSIRRPRPLLEVDTPPSGSVAGISELGLSMKPLEQEPMLAARITIEHGLCLLLDI
DDIDRFLQFNEHQDGGAQLRHRRDMLLEGLAASLQLADQLGNSGHAVGLGPKDDIVFLRL
VSLPKGRKLINRFLQLLFPGGELTRIVCMGIFRNLIFLFGGLPSDLGAAETTTNLAKTVS
ACINDMDLRALSACLIAVVCSTEQPPLRPFGSPAGDGASVILKSLLDRATKLLSDPQSAG
TCSLSSRALWQASFGEFFNMLTKYCVSKYDTVLQSVYVQNQPSAEAIGSEVTRAISDEMP
VDLLRSSLPHTNDSQRKLLLDFAQRSMPISGFNNHSGTSGQINSESVRS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctgatagcaaagatttgaaggacgccagtggacgtccatcagatgcactc
tttgatgcaacacagtatgcgttctttgggcaagatgccatggaagaagttgatttggga
ggtctggatgatgatggtgatgatcctgtgttcggatctgtcaatgatgatgatttctct
ttgtttgataaagatgagggtgtgggttttggatcgttatctgatgtggatgatctagca
actacatatgcaaagttaaacagtgttgtcacggagccaaaaaatcctggagttattggc
aatagaggttccgaatctttttcaagagaaagttcatctgccactgactgggcacaagat
ggagaacttggaagcttgctggatcagcaaatgccttgtatggaagacgcccaggagctc
aagagatggccatcacagccacaaccttcctctgctcgtttcagtgaatcaaagcctctg
tacagaacttcctcatatccgcagcagccaccacagctgcatcagtacacaagcgaacca
attttggtatcaaagtcaaattttacatctttccctcttcctggtggcagatcccagcaa
gcttcactgcagcacccatatatttcatccctatccgatgtatcagggtcgcccttctct
gcgccaaacttctctccattacccaactctaaccctcatctggctggtttacaccatggg
ttggactatggtggaaatgttccccagtacagctctccggaacttttgtttaatagcagg
ggacaaaaccattggcctaaccacagtgggttattacatggagatcagtccagcctctta
caaaatatattgccaccgcacttatctcgccatgatggcgtattttcatcgcagtcgcat
ctgcagcaacagcagagactgcatgcttcacttcaaccatctttctcccatttggcggga
atgcaatcccaaccttatcattccaatcctgcaccaacacatagaatgatgtttggtttg
gtgcaatttaggtccaagtatatgacgaccgaagagatagagagtattcttcgagctcag
catgctgccactcatagcagtgacccatatatcgatgattattaccaccaagctcgtctt
gctcaaaaatctgctgggtccaggataaagcaccatttctccccatctcacctgaaggaa
cttccctctcagggccgtaacagtgcagaacagcatcctcgtgcgcaagctgatgtactt
gggaggattcccttgacttccattcgcaggcctcgtccccttcttgaagttgacactcct
ccctctggttctgttgctggaatttctgagctaggactctctatgaagcctctggaacag
gaaccaatgcttgcagctagaatcactattgaacatggcctttgtctactacttgatata
gatgatattgacaggttcttgcaatttaacgagcatcaagatggtggggcccagctacgg
catcggcgggacatgctgcttgaagggttggcagcatcacttcagcttgctgatcaactt
ggcaacagtggccacgctgttggcctaggccccaaggatgacattgtgttcctacgatta
gtctctctcccgaagggaagaaagcttatcaataggtttctacagcttctatttccaggt
ggtgagctcacccgaattgtttgtatgggcattttccgtaatttaatatttttgtttggc
ggtcttccttcggatttgggagcagctgagactactactaatctggccaagacagtttct
gcttgtattaatgacatggatctacgtgcacttagtgcttgtcttatcgcagttgtttgt
tcaacagagcagccgccattgcgcccctttggaagccctgctggggatggggcctcagtt
attttgaagtctctacttgaccgggcgactaagctgttatctgatcctcagtctgctggc
acctgtagcttgtcatctcgggctctctggcaggcatcatttggcgaattttttaatatg
cttactaagtattgcgtgagtaaatatgacaccgtattgcaatcagtctatgtgcagaac
cagccaagtgcagaggctattggttcagaagtcaccagggcaataagtgatgaaatgcct
gtggatcttctgcgatcaagtctgccgcacacaaatgatagccagcggaagcttctatta
gattttgctcagagatccatgcctattagtggattcaataatcattccgggacaagtggc
caaataaactctgaatcagtgagaagttaa
DBGET
integrated database retrieval system
