Tripterygium wilfordii (thunder duke vine): 119997205
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Entry
119997205 CDS
T07256
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119997205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119997205
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
119997205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
119997205
NCBI-ProteinID:
XP_038700001
LinkDB
All DBs
Position
4:2755526..2757775
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AA seq
230 aa
AA seq
DB search
MADESAMAVPVMVNHSNSIANHENGLDHRPQSSVSVIDIYPLSCYYFGSKEALPFKEETL
ADRVRRLKLNHDAHGLRTCVEAVMLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIDG
LRRKLSRKLSVGEDGSGLDWEVGECLGMWWRADYETLLYPYLPPNLRSPKECTKLFLVKL
PESRKFIVPKTQKLLAVPLCQIHENHKTYGSVISGVPQLLSKFSFNIIDS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagtctgcgatggctgtgcctgtcatggtaaaccacagcaacagtattgct
aatcatgaaaatggcctcgatcatcgtcctcaaagcagtgtgagcgtgatagacatatat
ccgctcagttgttactattttggatccaaagaggctctccctttcaaggaggagaccttg
gctgatcgagttcggagattgaaattgaaccatgatgctcatggattgaggacttgtgtg
gaagcagttatgctggtcgagttgtttaagcatccgcatctgttgctgttacaagtgaga
aattccatctttaagcttcctggtggtcgtttgagaccaggtgaatcagatattgacgga
ctgagacgcaaattgtcaagaaagctttctgtcggtgaagatggtagtggtcttgattgg
gaggtgggggaatgtcttggtatgtggtggagggctgactatgaaactttgctgtatcca
tacctgcctcctaatttaagaagtcctaaggagtgcacgaaactcttcctggtaaagttg
cctgagagtcgaaaattcattgtgccaaaaacccaaaagttgcttgctgttccattgtgc
cagattcatgaaaatcacaagacatatggatcggtaatatcaggagtcccacagctgcta
tccaagttttccttcaacattattgactcttga
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