Tripterygium wilfordii (thunder duke vine): 119997229
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Entry
119997229 CDS
T07256
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119997229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twl03032
]
119997229
03400 DNA repair and recombination proteins [BR:
twl03400
]
119997229
DNA replication proteins [BR:
twl03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
119997229
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119997229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
DUF2498
Motif
Other DBs
NCBI-GeneID:
119997229
NCBI-ProteinID:
XP_038700036
LinkDB
All DBs
Position
4:complement(6590124..6602466)
Genome browser
AA seq
978 aa
AA seq
DB search
MLKTKTFKGANVFMSRKLVPPEIFDALLDALKHNGAEVFLCCDPSRNGPEDYHVIASPDH
EKFEDLRAKGCNVLGPQCVLSCAKEHRALPKQGFRCCLAMDGLKVLVSGFEMDEKVKIEK
MVTAMGGVLHTKASSDASFVIVKNVLAAKYKWALNILQKPVVTLNWLYQCWNEHRVVPQE
SYRVLPFSGLTICITRIPADERKEIEKLIVQNGGKYSAELTKKCTHLISDAPEGDKYLVA
RRWGHIHIITRKWFDQSMTRRACLNEESYPVQGGSKSSKKTVSGCLMAQQSQGNDFGNQS
AHSSVPAESNMHTDPDLETTLSQNMSSMFADDPISIRMGDSEVPTVETTNEVNFDGCVAN
DSQSEDNDMYLSDCRIVLTGFEASEMRKLVNLVRKGGGSRYMSFDERLTHIVVGTPSEAE
KKEARGLAALGMINVVRSNWLEDCDREKKEVPVLRRHVAYDLLLPKESMKSTRGAVMGMT
GTNQSKSSTVHSNIVSDQLLASTNSGTVVSSALEKIMDQTLGAEMDRGGSLEATLRFSKK
SLLPSVNDHINDHKRTLHDSTAPVVQNRKSSNVFKQKFFRFSNSFPEDRRAEIVQWVNQG
GGKLVDDHIIHTVHYTIERHGVIAKSADAYQTTYVSSHWIRSCLEDGSLLAIGSHILFSP
LPCRIPFPGFQSFRFCVSQYEEKDRVLLRNFCFVLGAKFAEKLTKKATHLLCKFANGPKY
EAACKWGIHVVTSEWLYECVRQNEVVALDSFCPKEVTAEDREAGFCTVSQFPTQAARTLS
GESPSQFVSQLHEPIITPGIGVNSSREMTKQSSVNCKRARISEDDNEKSRFLGEEHATDS
ICNLNSNGDDISKDIGEPCNLVPDVAAAIEDLLEQTSKIQDQKSPERTGGSRSFFSSDCS
ILGGDNRDSHPVIGLSKHWLNRTGKKDGSCNPSEDLKERIYDGFSETQTESQVVGYEEDL
SGRQMLIDRVRTRSSSTC
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagacgaagacgttcaagggagcgaatgtgttcatgtcgcggaaactggtgcct
ccggaaatcttcgacgcgcttctcgatgcgctcaagcataacggagcagaggtattccta
tgctgcgacccttcccggaatggccccgaagattaccacgtcatcgcctctcccgaccac
gagaaatttgaggatctcagagctaagggctgcaacgtgctcggtcctcagtgtgttctt
tcatgtgcaaaagagcatagagctttgcctaaacaagggttcagatgttgccttgctatg
gatggtctaaaagtacttgtatctggttttgagatggatgaaaaggttaagattgaaaaa
atggtaacagcaatgggaggagtgttgcatacaaaggcatcttcggatgctagctttgta
attgtaaagaatgttttggctgcaaagtacaagtgggctttaaatattttgcagaaacca
gttgttactcttaattggttatatcagtgctggaatgaacaccgtgttgtcccccaggag
tcatacagagttcttccattttctgggttaactatatgtattaccagaattccagcagat
gaacggaaggagattgaaaagcttatagtacaaaatggtgggaagtattctgctgaattg
accaagaagtgcacgcatttgatttctgatgctcctgaaggtgacaaatatttggttgca
agaagatggggccacattcatattattactcggaaatggttcgatcaatcaatgactaga
agagcatgtcttaatgaggagtcctatcctgttcagggtggttccaaatcttcaaagaaa
actgtgagtggttgcttgatggcccagcagagtcaaggcaatgattttggaaatcaatct
gcacattcctctgtgcctgcagaatcaaacatgcatactgatccagatcttgaaacaact
ctttcacagaacatgtcatctatgttcgcagatgatcccatctctatcagaatgggagat
agtgaagtacctacagtggagaccacaaatgaagtaaattttgatggctgtgttgctaat
gattcccaatctgaagataatgatatgtacttgtcagattgtcgaatagtacttactggc
tttgaagcttctgaaatgaggaaattagttaatttagtacgtaaagggggaggctcacgg
tatatgtcctttgacgaaaggctaacacacattgttgttggaactccatcagaagctgaa
aaaaaggaagccagaggccttgcagctttgggtatgattaatgtagttaggtctaactgg
cttgaagattgtgatcgtgagaagaaagaagttcctgttttgcgaaggcatgttgcctat
gatttactgcttcccaaagaatctatgaagtctacccgaggagcagtgatgggtatgact
ggtacgaatcaaagtaaaagctccacagttcattcaaatattgtatctgatcagttactg
gccagtactaattctggaactgtagtgtcatcggcattggaaaaaattatggatcagaca
cttggcgctgagatggacaggggtggttctctggaagcaacattgagattttccaagaaa
agcttacttccttctgtgaatgatcacattaatgatcataagaggacgctgcatgattct
actgctccagttgttcaaaacaggaagtcatcaaatgtatttaagcagaaattctttcgc
ttttcaaattcgtttcctgaagataggagagctgaaattgttcaatgggtcaatcaaggg
ggaggaaagttggtggatgaccatataatacatactgtgcactatactatcgaacgccat
ggtgtgatagcaaagtctgcagatgcttaccaaactacatatgtatccagtcactggatc
cgttcttgtttagaggacggatcattgctggctattggcagtcacattcttttttctcca
ctcccttgtcggattccatttcccgggtttcaaagctttcggttttgtgtttcacaatat
gaggagaaagatcgagtactactgagaaatttctgcttcgttcttggagctaaatttgca
gagaagctgacgaaaaaggccactcatctactgtgtaaatttgccaatggacccaagtat
gaggcagcttgtaagtgggggatacacgtagttacctctgagtggctttatgagtgtgtc
aggcagaatgaagttgttgctctggattcattttgtccaaaagaagttactgcagaggat
cgagaagcaggattttgtactgtgagccagtttcctacccaagctgctcgaacattatct
ggggagagtccgtctcaatttgtaagtcaattgcacgagccgataatcacacctggtatt
ggagttaacagctctagggaaatgacaaaacaatcaagtgttaactgtaaaagggcaagg
atttcagaagatgataatgagaagagtcggtttttgggtgaagaacatgcaactgattct
atttgcaacttgaattccaatggagatgacatatcaaaagatattggggaaccttgtaat
cttgttcctgatgtggctgcagctattgaggacctgttggaacagacgagtaagattcaa
gaccagaagtctcctgagaggactgggggcagtagaagttttttttcatctgattgttca
atccttggtggagacaatagagattctcaccctgtcattgggttgtccaagcactggtta
aacaggacggggaaaaaagacggtagctgcaatccttctgaagatctgaaagagagaata
tacgatggttttagtgagacacaaacagaatctcaggttgttggttatgaagaagatttg
tctggcagacaaatgcttatagacagagttcgaactcgtagtagcagcacgtgttga
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