Tripterygium wilfordii (thunder duke vine): 119997289
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Entry
119997289 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119997289
03041 Spliceosome [BR:
twl03041
]
119997289
03036 Chromosome and associated proteins [BR:
twl03036
]
119997289
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119997289
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119997289
mRNA cycle factors
Common to processing body (P body) and stress granule
119997289
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119997289
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119997289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119997289
NCBI-ProteinID:
XP_038700124
LinkDB
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Position
4:complement(4957171..4963419)
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AA seq
615 aa
AA seq
DB search
MTTSWADMAANSGTNNAAPGSANNGGISNTSALARSAYVPPHLRNRPASSDPPAPAYSGP
ASTNDRAGYGGPRWAGSKNDFRSGYGGGRVGGWGNRGGGWDRGREREANPFGDDDETEEV
FSEQENTGINFDAYEDIPVDTSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRN
AIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQGQGQSTHNRPLRGSRTAFPLALI
LSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLL
ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQHSDMPPQGVRQTMLFSATFPKEIQR
LASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRTNGVQGKQSLTL
VFVETKKGADSLEHWLSVNGFPATTIHGDRSQQEREQALRSFKTGITPILVATDVAARGL
DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNGSLAKSLSDLMLEANQ
EVPAWLSRFAVRSYGGGRNRRSGGGRFGSRDFRRDSSFTKGGSDYYGGGYSSGSGLGASS
GYGGGYGPGVTSAWD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcatgggcggatatggctgcaaactctgggactaataatgctgctcctggg
tctgcaaacaacgggggtattagtaacacttctgcacttgcacgatcggcatatgttcct
ccccatctccgcaatcggccagcctcttcagacccacctgctccggcttactctgggcct
gcctcaactaatgatcgagctgggtatggtggacctcgttgggctggttccaaaaatgat
tttcgttctgggtatggaggtggtcgagtaggaggatggggtaacagaggtggtggctgg
gaccgtgggagagagagggaagctaacccatttggtgatgatgacgaaacagaggaggtt
ttcagtgagcaggagaacactgggattaactttgatgcatatgaggatattccggtggat
accagtggggataacgtacctccacctgtgaatacatttgcagagattgaccttggggaa
gcactcaatctgaacatccggaggtgcaagtatgtcaaaccgacgcccgtgcagcggaat
gccatcccaatatctcttgcggggcgggatttgatggcatgtgcccagactggttctggc
aagacagctgctttctgtttcccaattatcagcggaattatgaagggacagggacaggga
cagagcacacataatagaccattacgggggtcgcgcacagcattcccgcttgctctcatt
ctttctccaactcgggagctttcttgccaaatacatgaggaagctaagaagttctcatac
caaactggggtcagggtggttgttgcttatggaggagctcctattaatcagcagctgcga
gacctggagagaggtgttgatatcctagttgcaactcctggaagattggtggatttgttg
gagagggctagagtttctttacaaatgatcaggtatctagctctggatgaggcagatcga
atgttggatatgggttttgagcctcaaattagaaaaattgtgcaacattctgacatgcct
ccgcaaggtgtcagacaaacaatgttgttcagtgctacctttccaaaagagatacagaga
ctggcatctgattttctttcaaattacattttcttggctgttggacgagtgggttcaagt
actgatttgatcgtccaaagagttgaatttgttcatgagtcggacaaaaggagtcatctc
atggaccttcttcatgcacagaggacaaatggtgtccagggcaagcaatctttgacatta
gtttttgtggagacaaagaagggagcagattcacttgaacattggttgtcagttaatggt
ttccctgctactactattcatggtgatagatcgcaacaggaaagagaacaagcattgcgg
tcatttaaaactggcatcacaccaattttggtggcaacggatgtggcagcacgtggtctt
gacattccccacgttgctcatgtggtgaactttgatctaccaaatgacattgatgattat
gtccatcgaattggtcgaacagggagagctggtaaaacaggcttggctactgccttcttc
aacgagaacaatggatcgctggcaaaatcattatctgatctaatgctagaggcgaatcaa
gaagtacctgcttggttatctcggtttgcagtgcgctcttatggcggagggaggaatcgt
cgttcagggggaggccggttcggcagccgtgactttcgaagggactcttctttcactaag
ggtggttcagattactatggtggaggctacagcagtggcagtggattgggggcttctagt
ggttacggaggagggtatggcccaggggttaccagtgcgtgggattaa
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