Tripterygium wilfordii (thunder duke vine): 119997344
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Entry
119997344 CDS
T07256
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119997344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119997344
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119997344
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
DUF7885
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
119997344
NCBI-ProteinID:
XP_038700213
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Position
4:6828122..6832423
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AA seq
380 aa
AA seq
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MFWEKTEMEGAARLRAEDLKMSFESLMSLGVDRASDRGVKMEGVVITEWKDIPMELLLRI
VSLVDDRTVIMVSGVCCGWRDAMCLGLTQLSLSWCKNNMNDLVLSLAPKFTKLRTLLLRQ
DKPQLEDNAVEVIANSCHDLEDLDLSRSLRLSDRSLYALAHICPNLTKLNISGCTSFSDD
ALEYLFAFCRNLKVLNLCGCVKAASNKALQAIGRNCCQLQYLNLGWCENVTDIGVMSLAY
GCPNLRSLDLCSCVLITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSLVQSRVKNKES
MWESMKRKYDEEGLRSLNISQCTSLTPPAVQAVCDSNPALHTCARRNSLVMSGCLNLTSV
HCACAVQAHRTYNMISHPAH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttctgggagaagactgaaatggagggtgccgccagattgagggctgaggacttgaaa
atgagctttgagagtctgatgagtcttggtgttgatcgtgctagtgataggggagtgaag
atggagggtgttgtaatcactgagtggaaagacattcctatggagcttttgttgaggatt
gtttcgcttgttgacgatcggacagtgattatggtttcaggggtttgttgtgggtggagg
gatgccatgtgcttaggcctcacacagctctccctttcatggtgcaagaacaacatgaac
gacttggttttatcgcttgctccaaaattcacgaaattgcgaactctgcttctgcgtcaa
gataaaccgcaactcgaggataatgctgttgaagtaattgcaaatagctgccatgatctg
gaggatcttgacctcagcagaagcttgaggcttagtgatcgctccctgtatgccttggct
catatttgtcctaatctcactaaactcaatatcagtgggtgcacttcattcagtgatgat
gcacttgagtatttgtttgcattttgccggaatttgaaagtcttaaatctctgcggatgt
gtaaaagctgcatccaacaaagcattgcaggctattggacgtaactgctgtcaattacag
tatttgaatctggggtggtgtgagaatgtgactgatataggggtgatgagtttagcatat
ggatgtcccaatctcaggtccctcgacttgtgcagctgcgtccttataactgatgatagt
gtgattgctttggcaaacagatgtccccatctgagatcacttgggctgtattactgtcgt
aacatcactgacagagcaatgtattcgttggttcaaagtcgagtcaagaacaaggaatcg
atgtgggaatccatgaagaggaaatatgacgaggaaggattaaggagcctaaacatcagt
caatgcacatcactcacaccgcctgctgttcaggcagtatgtgattcaaatcctgcactt
cacacctgcgccaggaggaattccctcgtcatgagtggttgtttgaatttgacatcagtg
cattgtgcatgcgctgtccaagcacatcgcacctacaacatgatttcgcatcctgctcat
tga
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