Tripterygium wilfordii (thunder duke vine): 119997406
Help
Entry
119997406 CDS
T07256
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119997406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119997406
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119997406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
119997406
NCBI-ProteinID:
XP_038700327
LinkDB
All DBs
Position
4:complement(342870..349950)
Genome browser
AA seq
674 aa
AA seq
DB search
MPFPFAVEVSFVYEWTMPRKVSYDVGYDDDDYNDYEGYDDCFELEQTGEHRSKQEKRSHG
VWHCAICTYDNEESLSVCDICGVIRNPLLNIDSNGDKGSAPFKFDVPSPDDLVSDGLHRS
KTGSKLSLQSNAKKLDSSSVLNRKDNVVGESSSTYGVVNKQSCEKSLEGSSLLVPKSKRD
ILDYSSYSISGDESHDLINNLSNISLKNKSGKSNKVDPGKANSRVHYQPEKWMFPSKAQD
DLTQLNLAIVGHVDSGKSTLSGRLLHLLERITQKQMHKYEKDAELQGKGSFAYAWALDES
SEERERGITMTVAVAYFDTRTYHVVVLDSPGHKDFVPNMISGTTQADAAILVIDASFGAF
EAGMDVTKGQTREHAQLIRSFGIDQIIVAVNKMDAVDYSKDQFDLIKLQLGAFLHSCNFK
KSSVTWMPLSVMENQNLVAAPSEVRLLSWYRGPCLLDAIDFLQPPSRDLSKPLLMPICDV
IKLPTMGQESACGKLETGVLRSGSKILVMPSGIVGSVHSLERDSQACGIARPGDNIAVSL
QGIDGGGLVMAGGVLCHPDFPVAVAKHLELKILVLEIATPILIATQLEFHMHHAKDAARV
TRILSLLDPKTGKEKKKGPRCLLAKQNAIIGVILNEPVCVEEFSNCRALGRVCLRALGRT
VALGIVTRVVEEQE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttccttttgcagttgaggtctccttcgtttatgaatggaccatgcctcgtaaa
gtgagctatgatgtcggttatgatgatgatgactacaatgactatgaaggctacgacgat
tgctttgaattagaacaaacgggggaacatcgatctaagcaggaaaagagaagtcatggc
gtatggcattgcgccatttgcacctatgataatgaggagagcttgtctgtatgtgatatc
tgtggggttattcgtaatcctttgttaaacattgacagcaacggtgataaaggatcagct
cccttcaagtttgatgttccatctccagatgatttggtttctgatggattgcatcgctcc
aaaacaggttcaaaattatcactgcaatcaaatgccaaaaagttagatagttcttctgtg
ctgaacaggaaagataatgttgtgggtgagagcagttctacttatggcgtagttaataaa
cagtcatgtgaaaaatcattagagggatcatctttgttggtgcctaagagcaagcgtgat
attctggactacagcagttattcgatcagtggggatgagtcacatgatcttatcaataat
cttagcaatatatctttgaaaaataaatctggaaagtcaaataaagttgatcctggaaaa
gccaactcacgtgtgcattatcaacctgaaaaatggatgttcccgagcaaagcacaagac
gatttaactcaactaaatcttgcaattgttggccatgttgattctggaaaatcaacactt
tcgggcaggctgctacatcttctggaaagaataactcaaaaacaaatgcacaagtatgaa
aaagacgctgaattgcagggtaaagggtcctttgcttacgcatgggcattggatgagagc
agtgaagaaagagagaggggaataaccatgacggtggctgttgcttattttgatacgagg
acgtaccatgttgttgtgcttgattctcctggccacaaggattttgttccaaacatgata
tctgggacaacacaagctgatgctgccattcttgtgatcgatgcctcatttggtgcattt
gaagctggtatggatgttacgaaggggcaaacaagggagcatgcacaactcatcagaagc
tttggtattgatcaaattatagttgcagtcaacaaaatggatgctgtggattacagcaag
gatcagtttgatttaatcaaactgcaactgggagcatttcttcattcttgtaatttcaag
aaatcttctgtgacatggatgccattgagtgtgatggaaaatcaaaatctagtggcagct
ccttccgaagttcgtctattatcctggtatcggggaccttgtttgttggatgcaattgat
tttctccaacctccttcacgggatctctcgaaacctttacttatgcccatatgtgatgtt
atcaagttacctacaatgggccaagagtctgcatgtggtaaattggaaactggagtcctt
cgaagtggatcaaagattttggttatgccatctggaattgtaggaagtgtgcattccctg
gagcgtgactctcaggcttgtggtattgcaagacctggagataacatagctgtcagtctg
cagggcattgatggaggaggtcttgtgatggctggaggtgttttatgtcatcctgatttc
ccagttgcggttgcaaaacatttggagttgaagattcttgttttagagattgccaccccg
attttgattgcgacccagttggaatttcacatgcatcatgcaaaggacgctgcaagggtg
acaaggatactgtcgttacttgatccaaaaactggcaaagaaaagaagaagggaccccgc
tgtcttttggctaagcagaatgccataattggggtcattttgaacgaaccagtttgcgtc
gaagagttctcgaattgcagagctcttggaagagtttgtttacgagcattaggtagaact
gttgccttaggaattgtaacccgagttgttgaagagcaggaataa
DBGET
integrated database retrieval system
