Tripterygium wilfordii (thunder duke vine): 119997420
Help
Entry
119997420 CDS
T07256
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
119997420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
twl04040
]
119997420
Ion channels [BR:
twl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119997420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
119997420
NCBI-ProteinID:
XP_038700363
LinkDB
All DBs
Position
4:14474559..14483309
Genome browser
AA seq
737 aa
AA seq
DB search
MVYSGYKSQYLDGPREKFVRLDDLDSRLSSSSPSEVKNCGFNVEALGHAGHSRNKTSRSF
KKGIRKGSAGLKSIGRSLGFGVSGAVFPEDLKVSEKKIFDPQDKFLLLCNKLFVISCILA
VSVDPLFFYLPVINDSSKCLGIDRKLAIAATTLRTIIDAFYLFRMALMFRTAFIAPSSRV
FGRGELVIDSAQIARRYLCRYFIVDFLAVLPLPQIVVWRFLQSSSGSNVLATKQALFYIV
LFQFLPRLFRMLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHVVGAFWYLLAIERND
SCWSGACTDDVKCNTKFLYCGNQRMEGYAAWSNNSDSVLQSNCSANDPNSPFDFGIYTNA
LSSGIVSSKNFISKICYCLWWGLQNLSTLGQGLQTSTFVGEVIFSIAVAVFGLILFALLI
GNMQTYLQSLTIRLEEMRIKRRDSEQWMHHRLLPLDLRERVRRYDQYKWLETRGVDEESI
VRSLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTESTYIVREGDPV
DEMLFIIRGRLESVTTDGGRSGFFNRSMLKEGDFCGEELLTWALDPKSGANLPSSTRTVK
AITEVEAFALIAEELKFVAGQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRHLKRK
NMELLRKEEDEAELEGSDGTTNNVGGRSYSLGATLLASRFAANALRGVHRNRVAKTAREL
VKLQKPPEPDFTAEDAD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggtttatagtggttacaaatcgcaatatttagatgggccacgagagaagtttgtcagg
ttggatgacttagactccaggttatcatcatcgtcaccttctgaagttaaaaattgtgga
ttcaatgttgaggcactgggtcatgctggtcattcaagaaataaaacatctaggtcgttt
aagaaaggaattagaaaaggatctgcaggacttaaatcgattggtcggtcgcttggattt
ggggtttctggggcagttttcccagaagatctgaaagtttcggagaagaaaatatttgat
cctcaagacaagttccttttattgtgcaataaactatttgtcatatcttgtattctggca
gtatctgtggatcccttatttttttatcttccagttattaatgactcatccaagtgtctt
ggtatagatcgaaagctagcaattgcagcgacaacattgcggacgattattgatgctttc
tatctatttcgcatggctctcatgttccgaacagcttttattgccccatcatcacgggtt
ttcggaagaggtgaacttgtgatagattctgcgcagatagcccgtcgatacctgtgtcgg
tatttcattgttgattttcttgccgtgcttccccttccacagattgtggtttggaggttt
ctccagagctcaagcggatcaaatgtactggctacaaaacaggctttattttatattgtc
ttgtttcagttcctgcctagattgtttcgaatgttacctttgacttcagaactaaaaaga
acagcaggtgtttttgctgaaactgcttgggcaggtgctgcgtattatttgctgttgtac
atgcttgctagtcatgtagttggggcattctggtacttgttggccatagaacgaaatgat
tcatgttggtcgggtgcctgtactgatgatgtaaaatgcaatacgaagtttttgtattgc
ggcaatcagcgtatggaaggttatgctgcctggagcaataacagtgattctgttctccag
tcaaattgctcagcaaatgatccaaattcaccatttgattttggaatctataccaatgca
ttatcatctggaattgtttcttctaagaacttcatatctaaaatctgttactgtttatgg
tggggccttcaaaatttgagtacgcttggccaggggcttcaaacaagcacctttgttggg
gaggttatattttctatagcagttgcagtatttggtctcatcctttttgctcttctgata
ggcaacatgcagacctatcttcaatctcttactattcggttagaagaaatgaggatcaaa
aggcgtgattcggagcagtggatgcatcatcgcctgcttcctctagatcttagggaacgt
gttagacgatatgaccagtataagtggctggaaacacgtggtgtggatgaggagagtata
gttcggagcctgccaaaggatcttaggagagatatcaaaagacacctctgtctcgcattg
gttaggagggttcctctttttgagaatatggatgagaggttgcttgatgctatttgtgag
cggctgaaaccatgtttatttactgagagtacttacatagttcgcgagggagatccagtt
gatgagatgctttttattatacgtggtcgccttgagagtgtaactacagacggagggagg
agtgggttcttcaaccgcagtatgttgaaagaaggggatttctgtggagaggagctctta
acgtgggcgctggatccaaaatctggggcaaaccttccctcttctactcggactgtgaag
gctataacagaggtcgaggcttttgctttgattgctgaagagttgaaatttgtggctggt
cagtttaggcgccttcacagtagacaggttcaacataccttccgattttactcacaacag
tggaggacttgggcggctatttttatccaagcagcatggcgccgtcatttaaagaggaag
aatatggagctgctgcggaaggaagaagatgaagcagaattagaaggctcagacggcacc
actaacaatgttggtggtcgttcttacagtcttggtgccaccttgttggcatccaggttt
gcagcaaacgctcttcgcggtgtacatcgaaatcgagttgctaagactgctagagaattg
gttaaactacagaagcctccagaaccagattttactgctgaagatgcagattga
DBGET
integrated database retrieval system
