Tripterygium wilfordii (thunder duke vine): 119997612
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Entry
119997612 CDS
T07256
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119997612
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119997612
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
119997612
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119997612
03036 Chromosome and associated proteins [BR:
twl03036
]
119997612
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
119997612
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
119997612
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
119997612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
119997612
NCBI-ProteinID:
XP_038700679
LinkDB
All DBs
Position
4:complement(1816805..1823565)
Genome browser
AA seq
518 aa
AA seq
DB search
MNGGNGVEEAAASTACGPEPLEWKFSQVFGERAAGEEVQEVDIISAIEFDSTGDHLATGD
RGGRVVLFERTDMRDHDGSRRDLERMDHPINRHPEFRYKTEFQSHEPEFDYLKSLEIEEK
INKIRWCQSANGALFLLSTNDKTIKFWKVQEKKVKKVCDMNMDPVNDVGNVPIVGSSTST
SLKPCIANGKCTEKRVGHSSCDFEFPSGGIPSLRLPTVVTSLEMSLVARCRRIYAHAHDY
HINSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTH
CNMLAYSSSKGSIRLIDMRQSALCDSHSKLFEQPEMPGTRSFFTEIIASISDLKFAKDGR
HILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVA
TGSYSNLFRVFGCSEGSTEATTLEASKNPTRRQVQTPSRPARSLGTLSRGFRRGADNSGG
DSNGNAFDFSTKLLHLAWHPTENALACAASNSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggaaacggtgtagaagaagctgcggcgagtacggcttgcgggccggagcct
ctggagtggaaattctctcaggtttttggcgaacgggctgccggggaggaagtacaggaa
gttgatattatttccgccattgaatttgatagtactggggatcaccttgccactggagat
cgcggaggtcgggttgttttatttgaaagaacagatatgagagatcatgatggaagtcga
agagatctagagaggatggaccacccaatcaataggcatcctgaattccgctataaaaca
gagtttcaaagccatgagcctgaatttgattatcttaagagcttggaaattgaggagaaa
atcaataaaattagatggtgtcaatcagccaatggcgccctatttcttctttcaactaat
gataaaaccatcaaattttggaaggttcaagagaagaaggttaagaaagtatgtgacatg
aacatggaccctgtgaacgatgtgggaaatgttcctattgttgggtcaagtacatcaacc
agcttgaaaccttgtattgcgaatggaaagtgcacagagaaacgtgttggtcattcaagc
tgtgattttgagtttccatccgggggcatcccttctttgcggttgccaacggtagtgact
agtcttgagatgagccttgtggctaggtgtcgaagaatatatgcccatgcccatgactat
cacattaattccatttctaataacagtgacggggagacttttatatcagctgacgattta
cgaataaatctttggaacctggaaatcagcagtcagagtttcaatattgttgacgtgaag
cccgcaaacatggaggatctgactgaggtgataacttcggcagaatttcaccctactcac
tgtaacatgttagcatatagtagttcgaagggctcaatccgtctgattgatatgcgacag
tcggctctgtgtgatagtcatagcaaattgtttgagcagccagagatgcctggcacaagg
tccttcttcacagaaattattgcgtcaatctcggatctaaagtttgctaaggatggaagg
catatacttagtcgagactacatgactctcaagttgtgggacataaatatggattctggc
ccggttgcaactttccaggttcatgaatacttgagacctaagctctgtgatttgtatgaa
aatgattctatctttgacaagtttgagtgttgtcttagtggagatggacttcgagtggca
actggttcctacagcaatctgttccgcgtgtttggttgttctgaaggaagcacagaagcc
acgacattggaggccagcaaaaatcccacgaggaggcaagtccaaacaccatcaaggcct
gctagatctctgggcactctatctcgtggtttcaggcgaggtgctgataactctggaggt
gattcaaacggaaacgcttttgatttctcaacaaagctgctacatctagcatggcatcca
actgaaaatgcactcgcatgtgctgcctcaaacagcctttacatgtactatgcataa
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